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Information for unigene UN16777
| FASTA Sequence |
| Unigene ID: UN16777 | Length: 730 |
SSR | | GGGAACACAGACATCGCAGTTTTCTCTCTCTCAATCTATCTCTCTCTCTCTCTGCTTGAATCGATTCGTTCCAGGGATTGTGGAGC
GGTTTGATTTGATATCGATCTGTGACAATGGTGGCCGCTGGGATCGACATGGATGAAGGAGCTCTCGAGATCGGAATGGAGTACAG
AACTGTGTCAGGTGTTGCAGGACCATTGGTCATCCTTGAAAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAACATTCGCTTAG
GAGATGGATCTATGAGACGTGGTCAGGTCTTGGAGGTTGATGGCGAGAAAGCTGTTGTCCAGGTTTTTGAAGGAACATCTGGAATT
GACAACAAATTTACCACTGTGCAATTCACTGGAGAGGTTTTGAAAACTCCTGTATCACAAGACATGCTTGGCCGCATTTTTAACGG
CTCGGGAAAGCCAATTGATAATGGTCCTCCTATTTTGCCAGAGGCATACCTTGACATCTCTGGAAGTTCAATCGACCCCAGTGAAA
GAACCTACCCTGAAGAGATGATTCAGACTGGGATTTCTACCATTGATGTCATGAACTCCATCGCTCGTGGACAGAAAATCCCTCTT
TTCTCTGCTGCTGGTCTACCTCACAACGAAATCGCTGCTCAGATTTGTCGTCAGGCTGGTCTTGTTAAGCGGTTGGAAAAGACTGA
GAACCTAATTGAGGATCATGGAGAGGACAACTTTGCAATTGT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002890376 hypothetical protein ARALYDRAFT_472256 [Arabidopsis lyrata subsp. lyrata] | 989 | 3e-105 |
| NP_173451 V-type proton ATPase subunit B3 [Arabidopsis thaliana] | 983 | 1e-104 |
| AAF88162 Nearly identical to vacuolar ATP synthase subunit B (V-atpase B subunit)(V-atpase 57 KD subunit) from Arabidopsis thaliana gi|137465 and is a member of ATP synthase alpha/beta PF|00006 family and contains an ATP synthase beta chain PF|01038 domain. ESTs gb|F14109, gb|AA650677, gb|N65767, gb|BE038735, gb|T88157, gb|F14079, gb|H76885, gb|N96777, gb|T14042 come from this gene | 983 | 1e-104 |
| AAC36485 nucleotide-binding subunit of vacuolar ATPase [Arabidopsis thaliana] | 974 | 2e-103 |
| AAF26763 T4O12.24 [Arabidopsis thaliana] | 967 | 1e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W4E2 V-type proton ATPase subunit B3 | 983 | 7e-106 |
| P11574 V-type proton ATPase subunit B1 | 967 | 5e-104 |
| Q43432 V-type proton ATPase subunit B 1 | 939 | 8e-101 |
| Q9SZN1 V-type proton ATPase subunit B2 | 932 | 6e-100 |
| Q40078 V-type proton ATPase subunit B 1 | 923 | 6e-099 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q3ED91 Putative uncharacterized protein At1g20260.1 | 983 | 1e-104 |
| A9PCK1 Predicted protein | 957 | 1e-101 |
| Q8GUB5 Vacuolar ATPase subunit B | 952 | 4e-101 |
| A1E9B1 Vacuolar ATPase subunit B | 951 | 5e-101 |
| Q9MB48 Vacuolar H+-ATPase B subunit (Fragment) | 950 | 7e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G20260.1 hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism | 983 | 6e-107 |
| AT1G76030.1 vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit | 967 | 5e-105 |
| AT4G38510.1 vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative | 932 | 5e-101 |
| AT4G38510.2 vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative | 932 | 5e-101 |
| AT4G38510.3 vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative | 932 | 5e-101 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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