RadishBase

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Information for unigene UN16778

FASTA Sequence

Unigene ID: UN16778	Length: 725	SSR
GGAAACCTCTCGAGGGAAGAAGAAGACAAGGAGGAGGAGAAAACTAAGAAGAAGAAGAAGAAGAAGAATAAGAAGATCAAGGGAGG AGAAAATGTTGCCCACAACTTCCAGATCTCGCTCATCACCTTCTTCATCCCGAGCCAACCCAATGTTCCTTCAGTATTTTCGCCGG ATCGTCAAGTGGCAGCAAATGGATGTTGAATATACTTTCTGGCAAATGCTTAACCTCTGTACATCTCCCAAAGTTGTCTATCAACA CACTAAGTATCACAAACAGACGAAAAACCAATGGGCACGTGATGACCCTGCTTTTATTGTGATCTGTAGCCTGCTTCTTATTGTTG CAACTTTAGCCTACTGTGCCACGTATGACCATAGTGGCTCTCATGCTGTCGTCGTAGTTGTATCAGTGTTCCTCACCCATTTCTTA ATCACTGGTGCAGTTATAGCTACATGCTGTTGGTTTCTGACGAACTCTTACCTTCGCGAGGAGGCTCCTAACAGTCATGTGGTGGA ACAACGTGTTGAATGGCTGTATACGTTTGATGTTCACTGCAACTCGTTCTTTCCAATGTTTGTGCTGCTCTACGTCGTACACTATT TCTTATCACCACTCCTGATAACTCATGGATTCATCGCTCTACTACTTTCAAATCTGCTTTTCATGGTCGGGGCTTCGTATTACCAT TATCTTAACTTCCTAGGATATGACGTGCTTCCATTTT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002885951 hypothetical protein ARALYDRAFT_899735 [Arabidopsis lyrata subsp. lyrata]	1103	2e-118
AAM61449 unknown [Arabidopsis thaliana]	1092	3e-117
NP_565370 UNC-50-like protein [Arabidopsis thaliana]	1088	9e-117
ACU14557 unknown [Glycine max]	954	3e-101
CBI40262 unnamed protein product [Vitis vinifera]	942	8e-100

Swiss-Prot top hits (Blast detail)	Score	e value
Q54DD7 Protein unc-50 homolog	549	1e-055
Q5U520 Protein unc-50 homolog B	420	1e-040
Q53HI1 Protein unc-50 homolog	412	1e-039
Q3ZBG6 Protein unc-50 homolog	405	7e-039
O55227 Protein unc-50 homolog	404	9e-039

TrEMBL top hits (Blast detail)	Score	e value
Q8LFF1 Putative uncharacterized protein	1092	2e-117
Q9SKL4 At2g15240/F15A23.2	1088	7e-117
C6SZ84 Putative uncharacterized protein	954	2e-101
B9GHS9 Predicted protein	922	1e-097
A9NL41 Putative uncharacterized protein	870	1e-091

Arabidopsis top hits (Blast detail)	Score	e value
AT2G15240.1 UNC-50 family protein	1088	4e-119

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	1			50%


8	1			50%

Unigene Members	Member information