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Information for unigene UN16801
| FASTA Sequence |
| Unigene ID: UN16801 | Length: 748 |
SSR | | GGAAAGCACCTCCGCACAGACAGAAAAAAAAACACTTGAGATCCGCCGAGAAGAAGAAGAAGATGGCGACGACTCAAGACGTGGAG
ATGAAAGACAACCAAACCCCAGCTCAATCCCTCGTCTCCTCCACCACCTCAACACTTCATCATCTGAAAGAGATTGCAGCTCTGAT
CGATACCGGCTCATACACCAAAGAAGTCCGCCGCGTCGCTCGCGCCGTGCGTCTCACCGTCGGGCTGAGACAGAAGCTGACGCCTT
CCGTCGTCTCTTCGTTCCTTGACTTCGCTTTGGTTCCCGGATCTGAGGCTCACGCTCGTCTCTCTTCCTTCGTTCCCAAGAGTGAT
GAACATGAGATGGAGGTTGATACTGCTTCGTCCACTCCTCCCTTGGCTTCCTCCAAGCACGTGCCTGTAGAGCTTGAGATTTACTG
CTACTTCATTGTCCTTCTTTTTCTGATTGACCAGAAGAAGTACAACGAGGCGAAAGCTTGCTCTTCAGCTAGCATTGCTCGTCTCA
AGAGCTTGAACAAGAGAACCATTGATGTGATAGCTTCGAGGTTGTATTTTTACTACTCTTTGAGTTATGAGATGACTGGTGATCTT
GCTGAGATTCGTGGTACTCTTTTGTCTTTGCACCATTCTGCAACTCTGCGCCATGATGAGTTGGGTCACGAAACGCTTCTGAATCT
GTTGCTTCGCAACTACCTGCACTACAACCTTTATGACAAGCTGAGAAGTTGAGATCAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34390 unnamed protein product [Thellungiella halophila] | 991 | 2e-105 |
| NP_173447 26S proteasome regulatory subunit N3 [Arabidopsis thaliana] | 980 | 3e-104 |
| AAL09760 At1g20200/T20H2_4 [Arabidopsis thaliana] | 980 | 3e-104 |
| XP_002893093 EMB2719 [Arabidopsis lyrata subsp. lyrata] | 979 | 4e-104 |
| AAM53298 putative proteasome regulatory subunit S3 [Arabidopsis thaliana] | 976 | 1e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LNU4 Probable 26S proteasome non-ATPase regulatory subunit 3a | 980 | 2e-105 |
| Q9LQR8 Probable 26S proteasome non-ATPase regulatory subunit 3b | 949 | 6e-102 |
| Q06364 Probable 26S proteasome non-ATPase regulatory subunit 3 | 806 | 2e-085 |
| P93768 Probable 26S proteasome non-ATPase regulatory subunit 3 | 789 | 2e-083 |
| Q1ZXD3 26S proteasome non-ATPase regulatory subunit 3 | 412 | 1e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6EMB6 26S proteasome subunit RPN3a | 980 | 2e-104 |
| Q93ZI2 At1g20200/T20H2_4 | 980 | 2e-104 |
| Q5XF45 At1g75990 | 949 | 9e-101 |
| B9S5K6 26S proteasome regulatory subunit S3, putative | 777 | 8e-081 |
| B9H1J7 Predicted protein | 776 | 1e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G20200.1 EMB2719 (EMBRYO DEFECTIVE 2719); enzyme regulator | 980 | 1e-106 |
| AT1G75990.1 26S proteasome regulatory subunit S3, putative (RPN3) | 949 | 6e-103 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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