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Information for unigene UN16824

FASTA Sequence
Unigene ID: UN16824Length: 1201 SSR 
CGTATGAAAATGGATCTTTAAACGAATAGTTATAGTTATAAGAGTTACATTTGTTAAATTGGTAAGCTATAGTTATAAGAGTTACA
TTTGTTAAATTGGTAAACTTTAAATTTAATACAGTACAAAAAAAATTAGTAAGTATTTTTTTTTGACAAAATTTAGTAAATCTGAG
AGAATGTTTATGGATGAATCTGTAGATATATTATCATAAAACACATCACCTTTTTGTTTTAAGAACAAATTTTCTGAAAACCTTTA
TGAATCAAATCATATTTGTTCTGAAAACCTTTATGAATCAAAAATCATACGGTGACAGTAAATAGATATAGCTTCAGCACAACCGC
AAGCCCCAGCTGCAAAAGAAATATACTTGCGATTATCAGGATTGATCTCTCTCCAGCTGAATTGATATGCGCTTTGAGGTTCAGAG
CTACAAATGTCGCAGACATGAACCCTGCCACACCCGCGATGACCCATCTAAAGATCTCCACTGGCACCACCGACAGGCACAATGCA
GGGATGAAGATGAACAAGGAATAGCCGTAGAGGCAGAAGAGCTGGACAAGCCCTGAAGGCGCAGAGAAGTACTTGAGAACAACATA
CAACGCGAGAGGAACAAGCGTGACATATCCATAGAACACTCCTGCGGACCAAGTCACAAGATTGATATCGTAGTTCCATTCCTGTT
TCTTCCATTTGTGTGCCACGTACGTGACAAACGTGCCGATAGATGCCGCCACGAATATCAAAGTCGTGCATATCCAAAACGGACCA
TACAAGTCAGGCTTATCGGCAGTCTTCTCAGTAAAAGTTCCACGGAACGGGAACAGAGACTCTTTGAGTCTGTCCACAACATCCGA
AGTGTCGACATCGAAGAACGGCTTGTAAGCACCAACAGTGAATTTATGGAGCCAGCCACCAGTCTGAGGTTCATCTCTACTACTAC
TACTACCGTTACCAGGTCCAGAAAATGTATCGTCAGCATCACGAGGGGGATTACTACCACCAGAGATCTTGCCCTGAGCAGCAGAA
GGAGGAAAGGTTTGAAGATTTGATTCTGTGAATTTGACGGTGGTGTGGCCTGGATCTGGAACAGAAGGTACAGATCCAGAGACTTT
CTGGCTGTCGATAGTCGTGTAGTTCCCGCCGGTCATCATCTTGCTCTCCTCCTCCTTCCTTCTCGATCTCACGTTAGTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187179 Integral membrane Yip1-like protein [Arabidopsis thaliana]13921e-151
AAF27034 unknown protein [Arabidopsis thaliana]13866e-151
XP_002884498 integral membrane Yip1 family protein [Arabidopsis lyrata subsp. lyrata]13785e-150
NP_198101 Yip1 integral membrane domain-containing protein [Arabidopsis thaliana]13104e-142
AAR23733 At5g27490 [Arabidopsis thaliana]12998e-141

Swiss-Prot top hits (Blast detail)Scoree value
Q54TS4 Protein YIPF1 homolog3683e-034
Q6P6G5 Protein YIPF12984e-026
Q9BWQ6 Protein YIPF22984e-026
Q9Y548 Protein YIPF12941e-025
Q91VU1 Protein YIPF12931e-025

TrEMBL top hits (Blast detail)Scoree value
Q8GWB3 Putative uncharacterized protein At3g0528014035e-153
Q9MA91 T12H1.25 protein13982e-152
Q6NPD4 At5g2749013094e-142
B9RF52 Protein YIPF1, putative12172e-131
B9MZU7 Predicted protein12144e-131

Arabidopsis top hits (Blast detail)Scoree value
AT3G05280.1 integral membrane Yip1 family protein14042e-155
AT5G27490.1 integral membrane Yip1 family protein13218e-146
AT2G39805.1 integral membrane Yip1 family protein4543e-045
AT2G39805.2 integral membrane Yip1 family protein4444e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  57%
 
103  43%

Unigene MembersMember information