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Information for unigene UN16842
| FASTA Sequence |
| Unigene ID: UN16842 | Length: 1555 |
| SNP | GGGAACGTTTCCTTACCAAGGAATCTGGTTCAGTGGATCATACGGAGCCATGACGAGCGTTCCCGCCAACATCGAGTACATGCTCA
AAACCAACTTCAAGAACTTTCCCAAAGGAGAGTTTTACAAGGAGAGGTTCCGAGATTTGCTCGAAGAAGGTATCTTCAACGCTGAT
GACGAGTCTTGGAAAGAGCAGAGACGGATCATCATAACCGAGATGCATTCTACGAGATTCGTGGACCATTCGTTCCACACCACGAG
GGAGTTGATACATAGGAAGCTCTTGAAAGTGATGGAGAGTTTTTCAAAGTCACAAGAAGCTTTTGATCTTCAAGAGGTTCTTTTGA
GGTTGACGTTTGATAATATCTGCATCGCGGGTCTCGGCGATGATCCTGGTACTTTGGACGTTGATCTTCCTCAAGTTCCGTTCGCT
AAGGCCTTTGAAGAAGCTACGGAGAGTACTATGTTTAGGTTCATGATTCCACCGTTTTTGTGGAAACCTATGAAGTTTTTTGACTT
AGGGTACGAGAAAGGGCTGAGGAAAGCTGTTGAGACGGTTCATGGGTTTATAGACGACGATGGTTGTGGACAGAATCAAGATGCTT
AAAGAAGAAGGAACGTTAGAGAGAAACAAATCAGATGTCCTCTCGAGGCTAATCCTTATAGAAAGTCACAAAAGAGGCAATGAGAA
TGATCGGTTCACCCTCAAGTTTTTCAGACAGTTCTGCACAAGTTTCATCTTAGCGGGACGTGACACGAGTTCTGTCGGGCTTTCTT
GGTTCTTCTGGTTGATAACGAAACATCCTGAAGTTGAAAACAAGATCCTCCAAGAAATAACAGAAATCTTGAGCCGAAGAGACAAT
AATCTTGATGAGAGTTGTTGTCACTTCACAGTCAAGGAGCTAAACGACATGGTGTATCTACAAGCGGCCTTGTCTGAAACTCTTAG
ACTCTATCCACCAATACCAATGGAGATGAAACAAGCAACGGAAGAAGACGTGTTTCCAGATGGGACTCTCTTGGAGAAAGGTTCGA
GGGTTTACTTCTCTATCTATGCCATGGGAAGGATGAAATCAATATGGGGTGAAGACTGTGAAACGTTTAGACCAGAGAGATGGATA
CAAGGAGGACAGTACGTGAGTGATGATCAGTTTAAATACGTTGTGTTCAATGGCGGTCCAAGGCTTTGTCTAGGGAAAACATTTGC
TTACTTGCAGATGAAAATGGTGGCTGCTTCCATCTTGTTGAACTACTCAATCAAGGTTGATCAAGATCATGTTGTTGTGCCTCGAG
TTACAACTACTTTGTACATGAAACATGGTCTTAAGGTCAGGATCATGAAGAGATCTTTAGAGGAGAGGAAGCAAGATTCATAAGTA
AATAAGAAGAAATCAACTAAATGTTACATGGAATTTGTTACTAAAATATTTGTTTATGTATGGTTAATGTAAGATCTTCACCCTTT
GTTCTATCTTAAAGTAGATTAGATACTTATATAATCTTTGTTAGTAAAATGTACAGTGTGTGTATTATTTGTAATGCAGATTAAAT
GTTCTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875311 CYP86C2 [Arabidopsis lyrata subsp. lyrata] | 1195 | 1e-128 |
| XP_002892730 CYP86C4 [Arabidopsis lyrata subsp. lyrata] | 1040 | 1e-110 |
| NP_172774 cytochrome P450, family 86, subfamily C, polypeptide 4 [Arabidopsis thaliana] | 1032 | 1e-109 |
| NP_172773 cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana] | 1030 | 2e-109 |
| AAO41955 putative cytochrome P450 [Arabidopsis thaliana] | 1029 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMY1 Cytochrome P450 86B1 | 690 | 2e-071 |
| O23066 Cytochrome P450 86A2 | 594 | 3e-060 |
| P48422 Cytochrome P450 86A1 | 532 | 4e-053 |
| P98188 Cytochrome P450 94A2 | 471 | 5e-046 |
| Q50EK3 Cytochrome P450 704C1 | 465 | 2e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SAE8 F3F19.17 protein | 1032 | 7e-110 |
| Q500V6 At1g13140 | 1030 | 1e-109 |
| Q84WE8 Putative cytochrome P450 | 1029 | 2e-109 |
| Q9ARG6 Cytochrome P450 | 1000 | 3e-106 |
| Q9LTN1 Cytochrome P-450-like protein | 957 | 3e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13150.1 CYP86C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 1032 | 4e-112 |
| AT1G13140.1 CYP86C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 1030 | 6e-112 |
| AT3G26125.1 CYP86C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 957 | 2e-103 |
| AT1G24540.1 CYP86C1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 759 | 2e-080 |
| AT5G23190.1 CYP86B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 690 | 2e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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