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Information for unigene UN16876

FASTA Sequence
Unigene ID: UN16876Length: 898  SNP
GGGAGGACTTGTACCACTTTGTAATAGTAATATGTAAAAACATGTCATAACACATTTTTGGGTCATACAAGTGGAAACCTGGGGGA
GACAAAGAGATCCAAGCCCATTCATTACAAAGGAAAGTACCAACAATCTTATACACAAATGGCTGAAAGCATATATCAATGAGAAA
GTTTGAATGAAATGATGAGGATGATGGCGAGAATGAGAGCAATGATCACTGAAGTAACGATCCATTTGTTCCTCGTCATTCTTCTC
GACATAGCCGTCAAGACCTTCTTGCTCTTGTCAATGGCCTCATCCACACCATGAAGCTTGCTGTGGGAGTGAAGGAGAGTTTGGCG
CTGCTGACTAAGATCTTGGAGAATGGAGACACCAAGCTCTTCGGTCTCCATCATGGTTCTTCTACTCTCTCTGATTCTGTCGCTAG
ACTGATCAAGCCTCTCCACGGACATTGCCAACCTCTCTCTTTGATCAGTAGAAACCGAGTGGGGATCGGCCATTCCAGATTCCATC
AACTCTTCACGTGCAGATTGATTAACATCTGGAGAAGAAACTCTCTTGAATTCCTTCTTGAGTTGGTTGAGGTCAGATTTGTATTC
TCTGAGTTTAGCAAGACAGGTAGCCTTAGCACTTGGCTGTAAACTCCTCGCCTCAAGGTCCATTTTTCTGATCAAGACATCAGCTT
CATCAATTCCAGATTTGATCTCACCAAGCTTCCCTTTCTTATCATCTCCATGGGGGAGAAGGGAAGCTGAATTGGATTTACGGGTG
AGATTAGTTGATAGCTCGCAGTACTGCCGCTCGTACCCTTCGAACACGTCGCTCATCTTCTTCTTCGATTACTCAATTGCTGGATT
TGCAGTTGATTTTGGATCTCGCTGAAAGGATTCAAAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564255 vesicle transport v-SNARE 12 [Arabidopsis thaliana]9563e-101
XP_002893388 v-SNARE AtVTI1b [Arabidopsis lyrata subsp. lyrata]9545e-101
AAF24062 v-SNARE AtVTI1b [Arabidopsis thaliana]9536e-101
XP_002315029 predicted protein [Populus trichocarpa]8712e-091
ACU14580 unknown [Glycine max]8075e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q9SEL5 Vesicle transport v-SNARE 129561e-102
Q9SEL6 Vesicle transport v-SNARE 116943e-072
Q9LVP9 Vesicle transport v-SNARE 136665e-069
O89116 Vesicle transport through interaction with t-SNAREs homolog 1A3011e-026
Q9JI51 Vesicle transport through interaction with t-SNAREs homolog 1A2893e-025

TrEMBL top hits (Blast detail)Scoree value
B9HXP4 Predicted protein8711e-091
C6SZA7 Putative uncharacterized protein8074e-084
A5B0Y2 Putative uncharacterized protein8065e-084
C6T3Z1 Putative uncharacterized protein7932e-082
Q307Y3 Vesicle transport v-SNARE 11-like7842e-081

Arabidopsis top hits (Blast detail)Scoree value
AT1G26670.1 VTI1B; SNARE binding / receptor/ soluble NSF attachment protein9579e-104
AT5G39510.1 SGR4 (SHOOT GRAVITROPSIM 4); receptor6943e-073
AT3G29100.1 VTI13; SNARE binding / receptor5268e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  29%
 
84  19%
 
122  10%
 
98  38%
 
111  5%

Unigene MembersMember information