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Information for unigene UN16899

FASTA Sequence
Unigene ID: UN16899Length: 1206  SNP
GGAAAGCCTATGGTATCCACCTTGGAACAGAGATGTGCAGAAAGATCTTGGCTCATGGAACAAAGTCTCTTCATCTCTACACATTG
AACATGGAGAAATCAGCTCTTGCAATATTAATGAATCTTGGTATGATTGATGAGTCAAAAATCTCTCGGTCGTTGCCGTGGAGACG
CCCAGCAAATGTTTTCCGTACTAAGGAAGATGTGCGTCCCATTTTCTGGGCAAATCGTCCGAAGAGCTACATTTCTAGAACTAAGG
GATGGGAGGACTCCCACAAGGCCGGTGGGGTGATTCACGCAGTGCTTCATATGGTGCACTCACGGATCATCAGTTCTCACGTCCAC
GAGCACGTGACAAGAAGCTTCAACAAGAATGGGTTGTCCCATTGAAAAGCGTTGAAGATATTCAGGAGAAATTCAAGGAGCTCTGT
CTTGGAAACTTAAAAAGCAGTCCATGGTCTGAACTGGACGGACTCCAGCCAGAGACAAAGATCATAAACGAGCAGCTGGTGAAAAT
CAACTCCAAAGGCTTCTTGACCATCAATAGCCAACCATCTGTCAACGCAGAGAGATCTGATTCCTCAACTGTTGGATGGGGTGGTC
CTGGTGGATACGTATACCAAAAGGCTTACCTAGAGTTCTTCTGCTCAAAGGAGAAGTTAGATGCAGTTGTTGAGAAATGCAAAGCT
TTGCCATCTATAACTTACATAGCTGTCAACAAAGGAGACAACTGGGTGTCAAACACTGCTCAATCCGATGTGAATGCTGTTACTTG
GGGAGTTTTCCCGGCTAAGGAGATCATTCAACCAACCATTGTGGATCCGGCTAGCTTCAAAGTCTGGAAAGATGAAGCGTTTGAGA
CTTGGTCAAGAAGCTGGGCTAACTTGTACCCTGAATCTGACCCTTCAAGAAACTTGCTCGAAGAGGTTAAGAACAGTTACTATTTG
GTGAGTTTGGTTGAGAATGATTACATCAACGGTAACATATTCACAGTCTTTGCTGATCTTTGAGAAGAACATCTGTTGTCCCACGG
CTTTCATGATTTGGCTTTTGTAATGTCTCTTAAAATATTGGGAATATAGTTTTATATACATCATGTTGTCATCATTATCATGTTGA
TTTGCCAATAAAGTTTGTATTGTTAAAGAAAGCATCTTTCTCCCTACCTATGTGACACAAAAGTTGCCTGAAACAAAGTTTTCATT
AG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880088 MTHFR2 [Arabidopsis lyrata subsp. lyrata]12584e-136
NP_566011 methylenetetrahydrofolate reductase 2 [Arabidopsis thaliana]12451e-134
AAK43892 putative methylenetetrahydrofolate reductase [Arabidopsis thaliana]12451e-134
CAB53783 methylenetetrahydrofolate reductase [Arabidopsis thaliana]12414e-134
NP_191556 methylenetetrahydrofolate reductase 1 [Arabidopsis thaliana]11375e-122

Swiss-Prot top hits (Blast detail)Scoree value
O80585 Methylenetetrahydrofolate reductase 212456e-136
Q9SE60 Methylenetetrahydrofolate reductase 111372e-123
Q75HE6 Probable methylenetetrahydrofolate reductase9822e-105
Q9SE94 Methylenetetrahydrofolate reductase 19751e-104
P42898 Methylenetetrahydrofolate reductase5162e-051

TrEMBL top hits (Blast detail)Scoree value
B9DHL6 Methylenetetrahydrofolate reductase (Fragment)11373e-122
B9HG95 Methylenetetrahydrofolate reductase10603e-113
B9N8L0 Methylenetetrahydrofolate reductase10585e-113
B9STA4 Methylenetetrahydrofolate reductase10513e-112
A5ATB7 Methylenetetrahydrofolate reductase10235e-109

Arabidopsis top hits (Blast detail)Scoree value
AT2G44160.1 MTHFR2 (METHYLENETETRAHYDROFOLATE REDUCTASE 2); methylenetetrahydrofolate reductase (NADPH)12464e-137
AT3G59970.3 MTHFR1 (METHYLENETETRAHYDROFOLATE REDUCTASE 1); methylenetetrahydrofolate reductase (NADPH)11372e-124
AT3G59970.1 MTHFR1 (METHYLENETETRAHYDROFOLATE REDUCTASE 1); methylenetetrahydrofolate reductase (NADPH)4283e-042
AT3G59970.2 MTHFR1 (METHYLENETETRAHYDROFOLATE REDUCTASE 1); methylenetetrahydrofolate reductase (NADPH)4283e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  13%
 
73  38%
 
92  25%
 
102  25%

Unigene MembersMember information