Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16910

FASTA Sequence
Unigene ID: UN16910Length: 904  SNP
GAGTTCAAGAGCTTCTTGATGATAACTGAACATGTAACGCAGAAGCAGGAAGATTGACGAGAATGTGGCTCGCCCTGGAACTCTGA
ATGTCCAAAGAGACCAAACAAACGCCTAATGTCAGAGGAGTAAATAGATTTTCACTCTTCCGGTGTGCGTACAGTTCAATTCACAA
TAGTTTAAAAAAAAATCACAATAGTTGTTTTTTCATGTCTTATTTCAAAAATCCATTGACCCTATGGAACACTGATCCACTCAATC
TGAATCTCAACCTCACCTCTTTCGACATTTCTCAGCTTGAGAATCATGTCTTGGACGATCTTTCCATTACTGAAAACGATTCTGCT
CTCTTCAACCAAACAATTGTCTGTACTCGGCTTCACTCTCTTGACCTCGGTTCCATCAGGGAGTTCTTGAAGACCCATTGCTTGGA
TCTCAAGAAACGGCCTGACGTCTATTTCCGCATCTCCCATCTTGTCATGGGAAGTGAATGTATCTTTATCATAAACTTCGAGATTC
ACAGGTTGATTATGATCATTGAATGCAAGCGTCAGTTCGTCGTTCCACTCAGGGTTACAGTTATTTTCCACACGACTAGTCTTCAA
TGTCTGTGGACCCATAGTTACGACAACGAAAGGGTCGCTGCTCTGAGAGTCTCTACTAACAAGATTAGTCCCTCTTTTCACTCGGA
TTCTAAGAAGTCCCACAAGATCCTCCATGTCTCCTCTGATAGAGCCCTTCTCTACTCGGATTCTTTAAAGAGAATGAATTTCGGAA
GAACAGTTTAGAAGCAAGTTATGTGTGTGGCCTCAAATGTCTGTGACTTATTCTTTAACCTCTGTCTTCGCAAGCATCTTCTGGAG
GATCTATTTATGCTACGGATCTTGTTTTTATAGTAGTTGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893267 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]6562e-066
NP_173727 calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana]6517e-066
NP_565002 calcium-dependent lipid-binding domain [Arabidopsis thaliana]6283e-063
AAK25852 unknown protein [Arabidopsis thaliana]6249e-063
XP_002887330 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]6222e-062

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFN9 Probable ADP-ribosylation factor GTPase-activating protein AGD133512e-032
Q9FVJ3 ADP-ribosylation factor GTPase-activating protein AGD123502e-032
Q8L7A4 Probable ADP-ribosylation factor GTPase-activating protein AGD113342e-030
Q6DN14 Multiple C2 and transmembrane domain-containing protein 11414e-008
Q5RJH2 Multiple C2 and transmembrane domain-containing protein 21405e-008

TrEMBL top hits (Blast detail)Scoree value
O49303 At1g231406515e-066
Q9SSL1 F15H11.6 protein6282e-063
Q9C5M6 Putative uncharacterized protein At1g708106246e-063
A1X1E6 C2 domain-containing protein6068e-061
Q9S764 At1g708005762e-057

Arabidopsis top hits (Blast detail)Scoree value
AT1G23140.1 C2 domain-containing protein6513e-068
AT1G70810.1 C2 domain-containing protein6281e-065
AT1G70800.1 C2 domain-containing protein5761e-059
AT1G48590.1 C2 domain-containing protein4927e-050
AT1G70790.2 C2 domain-containing protein4892e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
119  69%
 
82  15%
 
62  15%

Unigene MembersMember information