Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16915

FASTA Sequence
Unigene ID: UN16915Length: 861 SSR 
GCCCAATGATCAGCTAGATAAAATCTCCTTTTATGGATATATAGCATTGCATTTAGTATTCTCTTTTTTTTTTAAAGTAGTTCACT
CTTATCATCAGACAAGAACAGAAACGCAACACATAAAGTTATAATAAACCCAATTAATATCATATCTAGCGCCAAAAGAGGCCTCT
GCTTTGATAGATTCTAACCAGAGCAGAGCTTTTCAAGCGCCAGATTCTCATCTCCACCACTTGATTCAATTGCACTCCTGACCTGA
GCATCTCCAAAACCCATCTCCACAAGTCTCTTCACTTTGTCCTCAAGAGAAGAGTTCTTGGCGAATGTTTGGGTCCAGTAACGGGC
TGTTGATACGAACACTTGATAGTTCTTCATGTACTGCTCAGCAACAACAGCATCTTGAGGGTCTTTAGGCTCTGGTGCAGAGAGTA
ATGCCTGGACAGAAACAAGAGCTGTCTTCAAAGTAAGAGCTGGACTCCACTGGTCTTTCAAGACATCCAAGCATATTGCCCCGCTT
TGGCTACTGATATTCGGGTGCCAAACTTTGGTTGAAAATTGCATCTTTGGAGGCTCAAAGGGATACCCTTCTGGAATGGTGATATC
GATCTGAAAGGTTCCGCCTTCGTAAGGAGTACCGATTGGACCGGGGATGGTTCCGGTGAGTCGGGTAAGGTTGTCGGATTTCGGGC
AGACCCGGATGCCCGAGGAGTCTCTGTCTTTCTCGCAATCTTGGAGCTCTTTCTGGACTCGGCTGATATCTATCATCCTCGCGATC
CGAATTGAACAATAATCCCCACAAAAGAGAGAGAGAGAATTGGAAGACAAAAAAAGATAAGATGTGTTTGAGTTAAAAGAAGCTTC
C

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865827 ubiquitin-conjugating enzyme 26 [Arabidopsis lyrata subsp. lyrata]9643e-102
NP_199900 ubiquitin-conjugating enzyme E2 27 [Arabidopsis thaliana]9572e-101
XP_002322290 predicted protein [Populus trichocarpa]8391e-087
XP_002511117 ubiquitin-conjugating enzyme E2-25kD, putative [Ricinus communis]8291e-086
XP_002318760 predicted protein [Populus trichocarpa]8237e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q9FI61 Ubiquitin-conjugating enzyme E2 279579e-103
O74810 Ubiquitin-conjugating enzyme E2 14712e-046
P61085 Ubiquitin-conjugating enzyme E2 K4685e-046
P61086 Ubiquitin-conjugating enzyme E2 K4685e-046
P61087 Ubiquitin-conjugating enzyme E2 K4685e-046

TrEMBL top hits (Blast detail)Scoree value
A9P939 Ubiquitin carrier protein8397e-088
B9RA92 Ubiquitin carrier protein8291e-086
B9I3X3 Ubiquitin carrier protein8235e-086
Q43780 Ubiquitin carrier protein7634e-079
Q2V986 Ubiquitin carrier protein7601e-078

Arabidopsis top hits (Blast detail)Scoree value
AT5G50870.1 UBC27 (ubiquitin-conjugating enzyme 27); ubiquitin-protein ligase9586e-104
AT5G41700.4 UBC8 (UBIQUITIN CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase3475e-033
AT3G08690.1 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase3403e-032
AT4G27960.1 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase3394e-032
AT4G27960.2 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase3394e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  75%
 
101  25%

Unigene MembersMember information