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Information for unigene UN16919

FASTA Sequence
Unigene ID: UN16919Length: 1452 SSR 
GGAAACTCTCGATTTCCTTCCCTCAATACATATACAAAAGCCAAGTCGGATCACACATATAAATATAGTTTTACATGTTAAGCTTC
TTGAAAAAGCTAGGGTTTTATTGGAGCTTTGGTCGATTGTATGATCCGAGTATCATCAATCGAGACATGTCTTCTTCTTCTTCTTC
CGAAATTAGGGCACAGAAGAAGCAACCGCCGTCTCCGATCTCTTCTCTCCCGGAAGAAATCTTCGTCGACATCGTAGCGCGTGTCT
CTCGATCCTATTACCCGACTCTCTCCCAAGTCTCGAGGCGTTTCCGATCGCTCATCGCTTCACCGGAGCTATACGCGAGACGATCC
TTCTTGGGGTGCACAGAGCAATTCATCTACGTCGCAATCTCCAAGGATCAGACCTCTGACATCCACTGGTTTACTCTTTGCATCAA
ACCTAACAGAGAAACGACGAGTGATCATCGATTGGTTCATCTCCCTTCGCTTCCTCCGATGCCTCTACAGGGAAGCTACGTCGCCG
TTGGTTCTAACATCTTCGTGATGGGTGGATTTCAAGATTGGAGCATCACGTCGAGTGTTTCTCTCATCGATTGTAGATCTCACACG
TCTCGGCCTCTCGCTGATATGCCCAAGGCGGTCGCTGGTTCCGTAGCGCAAGTAATTGACGGCAAGATTTATGTAATCGGAGGATC
AGATGGTCATTCGCCGATGAAATCAAGGTCAAGAACTATGATGGTGTTTGATACGGAGACTGAGGTTTGGAAGCTTAAGCCGAGGC
CAGATTGGGAGCAAGGCAAAGTGTGGTTTAGTAGTGTCGCTATGGGAGGTAAGATTTACATGAGGACTTGCTACAATAGCTTCGTT
TACGATCCCATTGCAGTTCCCAATAGTTGCGTCGGAGATGAGCTTCTGCACTCCAAGGAGTGGTCCGGTTCTTGTGTCATCGATGA
TGTCTTGTATTACTATGACGTTCGTGGCAAGTGTTTGAGAGCTTATGATCCTAAGCTGAGATCTTGGGGAGTTGTGAAAGGTTTGG
AAGGTCTATTGCCGCGGGGTTGTTCATGGTCGAAAGCTGCGAGTTATGGAGGTGGGAAAATGGTTCTGTTCATGCAGAAGGAAGAG
ATCTGGTGTGCGGAGATTGCCGTGGAGAGACGCCTAGGAGGAGGTGATATTTGGGGTACAGTTAAGTGGTGTGAGGTTGTGCTTGG
TGGCAACTTTCGTATTATGGATTGTGTACCTGTTGCTGTTCTTCTCTGATCTTCTTGTGAATGAATACAAAAAAGGATACTTAGTA
GTATTGTCTCTTGGTGCTTGTATGAATGTTTGCTTTGTAAAACCTCCCTTGGGATGTGTTTCTCAGACGTCAATGTTTCGTGTTTG
TTGGGTCTATTTTACATCTGTGAATTGACTGAATCTAATCCTCATCATCATGATGTGTTCTTGTGTGCTTATGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866825 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]14423e-157
NP_195605 F-box/kelch-repeat protein [Arabidopsis thaliana]13752e-149
XP_002868894 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]5273e-051
NP_195635 F-box/kelch-repeat protein [Arabidopsis thaliana]5221e-050
NP_849387 F-box/kelch-repeat protein [Arabidopsis thaliana]4664e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVJ9 F-box/kelch-repeat protein At4g3894013756e-151
Q9SJ04 F-box/kelch-repeat protein SKIP65262e-052
Q9T031 F-box/kelch-repeat protein At4g392405225e-052
Q9SVA0 F-box/kelch-repeat protein At4g395804662e-045
Q9FFV4 Putative F-box/kelch-repeat protein At5g386804608e-045

TrEMBL top hits (Blast detail)Scoree value
Q0WWX6 Putative uncharacterized protein (Fragment)4663e-044
Q8GXX4 At4g149054663e-044
Q4ABZ3 117M18_273874e-035
B3H6V0 Uncharacterized protein At2g29780.23363e-029
O82373 Putative uncharacterized protein At2g298303069e-026

Arabidopsis top hits (Blast detail)Scoree value
AT4G38940.1 kelch repeat-containing F-box family protein13756e-152
AT2G21950.1 SKIP6 (SKP1 interacting partner 6); ubiquitin-protein ligase5262e-053
AT4G39240.1 kelch repeat-containing F-box family protein5225e-053
AT4G14905.1 kelch repeat-containing F-box family protein4661e-046
AT4G39580.1 kelch repeat-containing F-box family protein4661e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
116  75%
 
211  13%
 
201  13%

Unigene MembersMember information