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Information for unigene UN16923
| FASTA Sequence |
| Unigene ID: UN16923 | Length: 1387 |
| SNP | GGATCTAATGATCGATCGTAAAAGGCAAACATCGGCCCAGCACAAGGACCTGTACGTATATACATAGGATCATTGTCGTTATGTGG
AAGTTGAAAATAGGAGAGGGAAATGGGGAAGACCCTTACTTGCTCAGCAGCAACAACTTTGTCGGACGTCAAACATGGAAATTTGA
TCCCAAAGCCGGCACGGCAGAGGAACGAGGCGCCGTCGAAGAAGCTCGCCGGCATTTCTTGATCAACCGTCCTCGTGTAAAAGGCT
GCAGTGATATCTTGTGGAGAATGCAATTTCTGAAAGATGCAAAATTCGAGCAAGCCATCCCGCCGGTGAAGATCGACGGCGACGAA
GGCGTAACTTACGAGAAAGCGACGGATGCGTTACGGAGAGGAATTTCTTTCTTCTCGGCTCTGCAAGCCTTCGACGGTCACTGGCC
AGAAGATAGATCCTGAACAAATATTCGACTCTGTTAATCTCTTGCTATCTTTCAGAGTGAGAATGGAGGTATGACTGCATGGGAGC
CCGTCCGTGCTTATGAATGGATTGAATTCCTCAATCCCACGGAATTTCTCGCTAATCTCGTGGCCGAGCGTGAGTATGTGGAATGC
ACCTCATCTGTTATACAAGCTTTGATTCTGTTCAAGCAACTCTATCCAGACCACAGGACAAAAGAGATAAGCAGGTCCATCGAGAA
AGCTGTGCAATTCATAGAAAACGAACAGACGCCAGATGGTTCATGGTATGGGAACTGGGGAGTTTGTTTCATTTACGGAACATGGT
TTGCTCTTGCCGGCCTAGCAGCCGCTGGTGAAACATATAAAAACAGTCTGGCTATGCGTAAAGGTGTTGCGTTTTTACTCAGGACA
CAGAGAGACGATGGAGGCTGGGGCGAAAGCTATCTGTCATGCCCTGAACAGAGATACATACCATCAGAAGGGAAAACATCAAACTT
GGTGCAAACAGCTTGGGCAGTAATGGGTCTGATTCACGCTGGACAGGCTGAGAGAGATCCAGTACCTCTTCACCGTGCTGCAAAAC
TTATCATCAATTCGCAAATGGAGAATGGAGATTTCCCTCAACAGGAGATAGTAGGAGTGTTCATGAGGAATTGCTTGATACACTAT
GCTACCTACAGAAACACTTTCCCATTATGGGCACTTGCTGAGTACCGGAAAGCTACCTTCCCAATCCAAACTCAACAACATCATCT
TCAGCTTCCTTAGTAAATGTTTACAGATTATAGATAAAAAGAACAAAACAATGTCTACATATGGATGAAATCTCCTGTGTCTTTGG
CTACTTATTCAGATGTATGTTTATTCAGCAAAAGTAAACGAATAATAATATAATATGTCTCCTCTGTTTTTGGGCTAACTTTTATT
TTTTTTTAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887124 ATLUP2 [Arabidopsis lyrata subsp. lyrata] | 1142 | 1e-122 |
| XP_002887763 ATLUP2 [Arabidopsis lyrata subsp. lyrata] | 1056 | 1e-112 |
| AAC17055 Strong similarity to lupeol synthase gb|U49919 from A. thaliana, Landsberg strain. The cDNA gb|ATU49919 may come from this gene. EST gb|T22249 and gb|N96338 come from this gene (first gene in a series of three) [Arabidopsis thaliana] | 1039 | 1e-110 |
| AAB94341 2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis thaliana] | 1039 | 1e-110 |
| NP_178018 lupeol synthase 1 [Arabidopsis thaliana] | 1039 | 1e-110 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C5M3 Lupeol synthase 1 | 1039 | 6e-112 |
| Q8RWT0 Lupeol synthase 2 | 1037 | 9e-112 |
| P0C8Y0 Camelliol C synthase | 981 | 3e-105 |
| Q9FZI2 Lupeol synthase 5 | 956 | 2e-102 |
| B6EXY6 Beta-amyrin synthase | 911 | 4e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CDT2 Beta amyrin synthase | 947 | 4e-100 |
| Q2XPU7 Lupeol synthase | 943 | 1e-099 |
| B9GMD7 Predicted protein | 939 | 4e-099 |
| Q8W3Z1 Beta-amyrin synthase | 938 | 5e-099 |
| C7SCX1 Putative beta amyrin synthase | 934 | 1e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G78970.2 LUP1 (LUPEOL SYNTHASE 1); beta-amyrin synthase/ lupeol synthase | 1039 | 5e-113 |
| AT1G78970.1 LUP1 (LUPEOL SYNTHASE 1); beta-amyrin synthase/ lupeol synthase | 1039 | 5e-113 |
| AT1G78960.1 ATLUP2; beta-amyrin synthase/ lupeol synthase | 1037 | 8e-113 |
| AT1G78955.1 CAMS1 (Camelliol C synthase 1); beta-amyrin synthase | 981 | 3e-106 |
| AT1G66960.1 lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putative | 956 | 2e-103 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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