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Information for unigene UN16927
| FASTA Sequence |
| Unigene ID: UN16927 | Length: 1132 |
| SNP | GGGAAAAAATAAACACAGATCTTAACATTCTAATGGAGGTAAATCTGTTGGTTAATCAAAAAGTATCTACCAGTTTGATCGTCTAT
TGCACCTTTAGAATTGGACACGTACGAGTGTTCCTCACTAGCTCATCAAAATTTACCCTTTTACATAAGACTGATACATTTAGAAG
CCAAAGAAGCCGAGCTCGCTCGCTTTTTCCTTCTCAAAGGTTTCGAAATACTGATATATGATTGTCACAGCTAGCAAGATTCCAGT
CCCCGACCCAATGGCTCCCATGAAATCAGCCAAAACAGTGAGTGCACCGATGCAAACTCCTCCAAAAGCAGCTGCGGTCGGGATAT
AACGGTTCAGCTCCTTCTGCAAGTTCGACTCTCTGTGTCCCGGCATCACCATTTGTTGTTCCTTGAGCTGCTTAGCTACATCTCTA
GCAGAAGACCCGGAGACTTCAATCCAAGTCTTTGAGAAGAGGGCACAAGCGGTGAGCATGAAGACGATATAGAACAGAGCATGGAA
TGGATGAGCTGCCATCTCGGCAAAGCTTGCTGGAGCTGTGATTAAGTAAGCAAGACCACTAACTGGTATAGATTGTCCACTGTACT
CTGACTCTTTCCACTGTCCCAATAGGTTCACAAAGAAATTTCCACTGAACTTCCTGTATAGAAGCTGAGAGATGAAGTAGAGGTTT
GAGACGAGAGCAGATTGGAGAATGATCGGCATGTTGGAGGTGTAGAACAGCTTGATCGGGTAAGAACCCTGTTGGCCACGAGCACT
CTTTGACCTCACGGGTAACACAACACGGAACCCTTGGAAGTAGATAACGATCAGGAAGATCAAGACCGTAGCAAGCAAGTTGGTAA
CATTGGGAAGGTTTTGCCTGTAGAAAGCTTGTCTGAGCGCAGCAACCTTATTGGATTTAGTAATCAGCATATGGTACAAGGCGATG
ACAGCACCTTCGAACTCAGCTCCGCGGCCAGTGTTGATTGTTGTGGGACTAAATGATTTCCAGATAATGCTTTCACAGATATTGGT
AGCTATGAAAAGAGAGATCCCAGAGCCTAGCCCATAACCCTTCTGAAGAAGCTCGTCAAGGCAGATAACGATGATACCAGCAAAGA
AAAGCTGGAGGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAF88109 Putative protein transport protein SEC61 alpha subunit [Arabidopsis thaliana] | 1615 | 2e-177 |
| NP_174225 SecY protein transport family protein [Arabidopsis thaliana] | 1615 | 2e-177 |
| XP_002890804 hypothetical protein ARALYDRAFT_473141 [Arabidopsis lyrata subsp. lyrata] | 1615 | 2e-177 |
| NP_180972 protein transport protein SEC61 subunit alpha [Arabidopsis thaliana] | 1609 | 8e-177 |
| AAM65038 putative protein transport protein SEC61 alpha subunit [Arabidopsis thaliana] | 1604 | 3e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54XK2 Protein transport protein Sec61 subunit alpha | 1284 | 2e-140 |
| Q98SN9 Protein transport protein Sec61 subunit alpha isoform A | 1198 | 2e-130 |
| Q7T277 Protein transport protein Sec61 subunit alpha | 1198 | 2e-130 |
| Q7T278 Protein transport protein Sec61 subunit alpha | 1198 | 2e-130 |
| Q8AY35 Protein transport protein Sec61 subunit alpha | 1198 | 2e-130 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RWJ5 Putative uncharacterized protein At1g29310 | 1615 | 1e-177 |
| Q9LP58 Putative uncharacterized protein F28N24.2 | 1615 | 1e-177 |
| O80774 AT2G34250 protein | 1609 | 5e-177 |
| Q8LB07 Putative uncharacterized protein | 1604 | 2e-176 |
| B8A2Y6 Putative uncharacterized protein | 1506 | 5e-165 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G29310.1 P-P-bond-hydrolysis-driven protein transmembrane transporter | 1616 | 5e-180 |
| AT2G34250.1 protein transport protein sec61, putative | 1610 | 2e-179 |
| AT2G34250.2 protein transport protein sec61, putative | 1610 | 2e-179 |
| AT1G78720.1 protein transport protein sec61, putative | 1473 | 2e-163 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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