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Information for unigene UN16946

FASTA Sequence
Unigene ID: UN16946Length: 949  SNP
GGGACCGCACGCTATCTCCTCCCCTGTGAACGCTTCGCTCTAAAAGAAAAACAGAGCTAAGAGGAGGAGAGAAAACAAACAATTAA
ACTTTTCATCACGTGGAAAGCTTGATATAAGATCGTGGAGAGAGAGCAATATATACAAAATTAATCAAAAGGTAAATGAGCACGAC
GGGTCCGGCAAGGAAAAGCTCACTAATGGAAACTCTCTTGGGACTCCTTAGAATCCGCATCAAACGTGGCGTCAATCTCGCCGTCC
GTGACATTAATAGCAGTGATCCTTACGTCGTCGTTAAAATGGGCAAACAGAAATTGAAAACTCGTGTCATCAACAAAGACGTAAAT
CCAGAATGGAACGAAGATCTGACTCTCTCCGTCACGGACCCCAGTCTTACCGTTCTCTTGACGGTGTACGACCACGACATGTTTAG
CAAGGACGACAAGATGGGTGATGCAGAGTTCGAGATAAAGCCCTATATCGAGGCTTTAAAGATGCAACTTGACGGTCTTCCTAGTG
GTACCATCGTCACCACGGTTCAGCCATGTCGTCGCAACTGTCTAGCTGAGGAGTCTAAAATAACTTGGGTCGACGGTAAGCTCGTC
CAGGATCTCGTTCTCAGATTACGACATGTTGAGTGTGGAGAGGTCGAGGCTCAGCTTCAGTGGATTGACCTCCCTGGCTCCAAGGG
TCTATAAAACGTGTCTTCTATTTATAATTACCGTTACTATTTGAGGGTTTTCTTTTGAATTTGAATTAAACCTCAAAAACAAAACA
AGAACTGAACCATGTTGAAGTACAAAACGCGTATTAATCCATGCATGAGAGTATGAGGATTAAGAACGTTTGAGGGATGTTTTGTT
TCCCATATGGTGATCGAGTCGTATATATTATTGTCCTTGTATATTTGGATTAGCTATGTGCCTTGAATAAAAGCTTTGATTACCCC
GAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188425 calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana]8417e-088
XP_002891444 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]7521e-077
NP_175292 calcium-dependent lipid-binding domain [Arabidopsis thaliana]7242e-074
NP_001185174 calcium-dependent lipid-binding domain [Arabidopsis thaliana]7242e-074
XP_002530486 ARF GTPase activator, putative [Ricinus communis]7172e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFN9 Probable ADP-ribosylation factor GTPase-activating protein AGD133378e-031
Q8L7A4 Probable ADP-ribosylation factor GTPase-activating protein AGD113289e-030
Q9FVJ3 ADP-ribosylation factor GTPase-activating protein AGD123191e-028
Q6DN14 Multiple C2 and transmembrane domain-containing protein 11381e-007
Q6DN12 Multiple C2 and transmembrane domain-containing protein 21334e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LVH4 At3g179808415e-088
B4G290 At1g485907242e-074
Q9LP65 T1N15.217242e-074
B9SWW7 ARF GTPase activator, putative7171e-073
B2Z3P9 Pollen-specific C2 domain containing protein7026e-072

Arabidopsis top hits (Blast detail)Scoree value
AT3G17980.1 C2 domain-containing protein8422e-090
AT1G48590.1 C2 domain-containing protein7274e-077
AT1G73580.1 C2 domain-containing protein6343e-066
AT5G37740.1 C2 domain-containing protein5903e-061
AT1G66360.1 C2 domain-containing protein5492e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  33%
 
112  22%
 
121  11%
 
62  22%
 
71  11%

Unigene MembersMember information