 |
Information for unigene UN16960
| FASTA Sequence |
| Unigene ID: UN16960 | Length: 1001 |
SSR | | CTACATAATCTCGGTTGTTTTATTGCACATAAAACGACGACACAACAAACACACAAAACAGAGGAAAAGGGTAAGAAAGTGAAAAG
AAGATTACAATACTAACACAAAACACACAGAGGTACAATAATTTTATTTGAAATTAAACAAAAGCCTCTTTACTGTTTCTGGAGGT
CAACGACCTTAGCCCAAGCAGGCCTGGCAGTGATCTTCTTGACCCACTCGGAAACCTTAGGGCGAGACTCAAAGAGCTCCTTGGAG
TCAGTACCCATCAAGTAGTGGATGACAGGGAGGTGATGAAGATCAGCCAAAGTGAAGCAATCACAAGCGAGGAACTCAGATTTGGA
GAGCCTCGCCTCGTAGATATCCAAGACCCTGACGAGCTTGCCTTCGAGGTCTTGGACGGCAGCTGGATCGGTGGTCATGCCAAACA
TGCCTTTGAAGATACGCTCGAAGGCGATCTTGGAGGCGATAGGGTCGAACTGTTGACCTTCAACATTAAGCCAGACCTTGGTGATT
GCCTTGACTTTGTTGCACCCTGGGCACATAAGCTTCTCGCCTTTCTCACTGTATTCATCCGCTATGTACTCTGTGATGGCTCGTGA
CTCAAATAGAGTTAAGTCACCGTCTTGGAGAGCAGGGATTTGACCGAAGGGGTTGAGGGAAACGAAAGGCTCCTGTTTGTGAGCAC
CGGCTCTCATGTCGACGGGGATCAACTCGAAGTCGAGGTCCTTCTCGTAAAGAGCAGCGAGAACGCGCATGGTGGCGGTGGACATG
GGGACTCCGTGGACTTTGATGCTGGCCATGGTGATTGTCGGAGGAGAAGGAGAAGATTTGGTTGTGAATTTCAAGTTGGAATGAGA
ATGGGATGGGGAGAAGAGAAGGGACGAGTGGAGGAGTTTTATAGGAGGAGGAGGAAGGAGACTTCCTTGGAGAATAGTTCTCATCG
TTATTTTTTATTTCCAGAAACTTCTCACCACCACCACCACTATTCACGTTCTTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33833 unnamed protein product [Thellungiella halophila] | 1035 | 2e-110 |
| XP_002880321 glutathione S-transferase [Arabidopsis lyrata subsp. lyrata] | 1014 | 6e-108 |
| NP_850479 glutathione S-transferase 6 [Arabidopsis thaliana] | 990 | 4e-105 |
| AAC63629 glutathione S-transferase (GST6) [Arabidopsis thaliana] | 949 | 2e-100 |
| CAA64613 gst6 [Arabidopsis thaliana] | 908 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96266 Glutathione S-transferase 6, chloroplastic | 990 | 2e-106 |
| P46423 Glutathione S-transferase | 656 | 9e-068 |
| P46440 Glutathione S-transferase APIC | 634 | 3e-065 |
| Q04522 Glutathione S-transferase | 634 | 3e-065 |
| P30109 Glutathione S-transferase PARB | 626 | 3e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94BT5 At2g47730/F17A22.12 | 772 | 5e-080 |
| A0T2X7 Glutathione S-transferase | 732 | 2e-075 |
| B9T0U9 Glutathione-s-transferase theta, gst, putative | 690 | 2e-070 |
| D6BRD9 Putative glutathione-s-transferase theta (Fragment) | 687 | 4e-070 |
| O22330 Glutathione S-transferase, class-phi | 668 | 6e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G47730.1 ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8); glutathione binding / glutathione transferase | 991 | 1e-107 |
| AT4G02520.1 ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2); glutathione binding / glutathione transferase | 622 | 7e-065 |
| AT2G02930.1 ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3); glutathione transferase | 614 | 6e-064 |
| AT1G02930.1 ATGSTF6 (GLUTATHIONE S-TRANSFERASE); copper ion binding / glutathione binding / glutathione transferase | 596 | 8e-062 |
| AT1G02920.1 GSTF7; copper ion binding / glutathione binding / glutathione transferase | 592 | 2e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
