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Information for unigene UN16969

FASTA Sequence
Unigene ID: UN16969Length: 1318  SNP
GGAAACTTTCCCAAGCAACCTTCTTCCTTCTTCTTCTCCTCTGTCGCCGTTGTTGCTTAGCCATCGTCGTGCCAATGGCAAAGAAG
AAGGTGAAAGTTGTTGATTCTGGATTGGATACTATGAAGGCAATGGTTCATCAGCACGGTGAATTTTTCGATACAATGGTGGAGCT
CATCCCTGCGAGATTCTACTTACCTGATGAGACGGAGAGGAAGTGGTTTCCAGGTCTTAGCAAGGCTCAAAAAGCTAGAGCCAAGA
AGAAAACAACCGAGAATCTAAAGAAAGCAAGGAGGGACAGGTTGGATCCTGAGAAGTCTGCTTTGACTACTCTTGATCTGCTGAAA
CGGAAGATAGAGAAGGAGAAGAAGTTGAGTCATGAGATTGCTGCTGATGATGATGATGGCAGTGAGGAGGAAGCTGATAACAAGAA
GGCTAAGAGTGATTCGGCTACTTACGAGGAGCTGAGGCAACGTCTCCACCGCAAGATTGATGCGCTTAAAGGTGGTCGTGGGGGTT
CAGATAGACCGAGAAGTCATGAAAAGAGGAAGAAGATTGTGCCTAATAAGAGAAAGAGGGAGGAGAAGACTGTGGAGGAGGAGAGT
AAGATTAGCAGATAAAGGTAAGGGTAAGTTGGATGTGGAAGAGGCTGCTAAGGACCTTACGTACGGTTACGTCAAGATCGATGACG
ATGAGGAACACGGAAAGGGTAAGAAGCGGAGGCTTTCCAAGTCTAGAGAGCTTGAAAGGGCTTTGAAGCTAGAGGCTGCAAAGAAG
GATCCAGAGAAAGGTGAAGTGATCGCGAAGAAACACTCTTGGCAGGCGGCTACAAGCAGAGCAGCTGGTATCAAGGTCCACGACGA
TCCGAAGCTACTGAAGCAGAGCATCCACAAGGAGAAGAAGAGGCAGGAGAAGAACGCAGAGAAGTGGAAGGAGAGAGTTGAAGGGC
AGCAGAAGGTTAGAGTTGAGAAGCAACAGAAGAGATCAGGGAACATTGCGGAGAGGATTGAGCAGAATAAGATGAGGAAGATCGCT
AAGAGGGAGAAGAAGCTCCTTCGCCCTGGCTTTGAAGGTCGTAAAGAAGGGGTTATCAATGATGGCAAGTAAAAAACTCAAATTCT
TCCAAAGATGTGATGATCATCATCTCAAAGGCTGTGAAGAGCATCTTTTGCTGTTTGGGGAATTTTCGTGTAGTTCAAGTCCCTAG
CAATATCAGTTATGTTTTTTAGTTCGTTTTGTTTTGCAGTTTGCAGACTTTATCAAATGTTTGTTACACAATGTGTTCCTTAAAGT
TAATGGTCTTTATCAAGTTTTGATATAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196140 Surfeit locus protein 6 [Arabidopsis thaliana]7747e-080
NP_001078531 Surfeit locus protein 6 [Arabidopsis thaliana]7747e-080
XP_002871144 hypothetical protein ARALYDRAFT_487312 [Arabidopsis lyrata subsp. lyrata]7585e-078
CBI23738 unnamed protein product [Vitis vinifera]5936e-059
XP_002285524 PREDICTED: hypothetical protein [Vitis vinifera]5882e-058

Swiss-Prot top hits (Blast detail)Scoree value
O43082 Ribosomal RNA-processing protein 14-C1847e-013
Q54G38 Surfeit locus protein 6 homolog1613e-010
Q23525 Uncharacterized protein ZK546.141561e-009

TrEMBL top hits (Blast detail)Scoree value
A8MR82 Uncharacterized protein At5g05210.27744e-080
Q9FLD3 AT5g05210/K2A11_87744e-080
B9RJ85 Caldesmon, putative5882e-058
B9HSV6 Predicted protein (Fragment)5836e-058
B9HKW1 Predicted protein5721e-056

Arabidopsis top hits (Blast detail)Scoree value
AT5G05210.1 nucleolar matrix protein-related7742e-082
AT5G05210.2 nucleolar matrix protein-related7742e-082
AT2G27750.1 nucleolar matrix protein-related5207e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  22%
 
103  33%
 
112  22%
 
62  22%

Unigene MembersMember information