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Information for unigene UN16975
| FASTA Sequence |
| Unigene ID: UN16975 | Length: 1517 |
SSR | SNP | GGAAAGACAAAAAACTCTCTTTCGGCTTCCTTCTTGTCTGAATCATCTTGAGAGCAGTAGAAAAGATATGGAAGGATTAATCAAAG
GTTTAGCCGATGTTGCTTTCGGAGGAGACGAACGTCGCGGAGGAGATGATCAAAGGGACGAGAGACCCCGATCCACTTGGGCTAAT
GTGGTTTCTGGTGAGGACGATGATCATAACCGCGCGGGAGGATCGGTGCCATCGCCGCATGATCGACGCCAAAATCCAGAGGAGAA
TCAATGGGAGAAGAAGGGAGAAAGGATGTCCACAAGACATTCACATCAGGAAGAGAATGAGTATGCTGCTCAAGTAACCGAGCAAC
AAGACTCCTCGGAGAGCCAGAAAGAAGACAACGACGGTTGGGAAACCGTGGGGAAAAAGAAACCTTCAAGACAATCACATAAGGTC
AAGAAGGAGCAGTGGCAAGGCTACAAATGCCCAGCGAGTGAACAACACTACTCAGACGACTCTGAAACACACGGAGACCTAGAGCC
CTCACAGCTAGAGCTCTCAGGTCTCTCAGAAGCTTGCAACAAACTCTGGGAGCTCGACTCGAACCGCCTCGTCCCCGGAAACGATT
ACCAGATCGACTGCGGAGATGGGAAAAGAGTCCACGAGAGATCAGACATGGCTGAAGGGTTACTCTTCTCTTGGGTGAGCGACGAG
GTCTTCAGAAAACCGACGTTCGCTAGGTTCTGCTCGTTGCTCGACAACTACACCCGCACGAAGTTACAAAGAAGTTGTCACCGAAG
AAGAGAGGCAAGAGCAGGCGGCTTTCATCGAAGAGATCAGCAGAACCGCTGTTGTTAAGTACCTTCACAAGTACCTTGCGATCAAG
GACGTTGCTCCTGGGAGCTACCAAGAGTTCAAGAGAATGCTGACCAGTCTCTGGTTCGATCTCTATGGACGTGGAGGCACCTCTGG
CTCCTCTTCTGCCTTTGAACATGTCTTTGTAGGTGAGATCAAACAGTGTGGTGGAGAACAAGTCTCTGGCTTCCATAACTGGCTTC
AGTTCTACCTAGAAGAAGCCAAAGGATCAGTTGATTACCAAGGGTATATATTCCCCCGTCGTCTTGGTGAAATTCCTGATTCAGAG
ACTCAGCTGCTAACGATCCAGTTCGAGTGGAACGGTGTTTTGAAATCAGTGTCGAGTACACTAGTTGGAGTTAGTCCAGAGTTCGA
GTTGGCTCTGTACACGATGTGTTTCTTCATGGGAAGGGAAGACAACCACATTCAGTTGGGTCCATACTGTGTCAATGTCAAATGCT
ACCGACTTGGCAACAACCGTATTGGCTCAGCTTTCCCCATTGCAGAATCTTGATAACCTCTCTCTCTCTTTCTTGATGGGTCCTTA
ATCAAAAAAAAACATTACAAAATATCTATGCGTTGAGCAGTACTCTATTGGATTATTATTATTGTTGTCAGAGATCTTTCTGTCTA
CCTGTTAGACTTATAGAAATATCTTGTTTTGATATTTCCTTGGATATTTTATGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868084 hypothetical protein ARALYDRAFT_915009 [Arabidopsis lyrata subsp. lyrata] | 998 | 8e-106 |
| NP_193443 uncharacterized protein [Arabidopsis thaliana] | 983 | 5e-104 |
| NP_001190746 uncharacterized protein [Arabidopsis thaliana] | 983 | 5e-104 |
| XP_002517514 Placental protein 11 precursor, putative [Ricinus communis] | 835 | 7e-087 |
| XP_002282850 PREDICTED: hypothetical protein [Vitis vinifera] | 829 | 3e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q503V9 Poly(U)-specific endoribonuclease-B | 403 | 3e-038 |
| B1H3D5 Poly(U)-specific endoribonuclease | 377 | 4e-035 |
| Q8JFY9 Poly(U)-specific endoribonuclease-A | 376 | 5e-035 |
| B1WBB4 Poly(U)-specific endoribonuclease-B | 376 | 5e-035 |
| Q1LUM3 Poly(U)-specific endoribonuclease-C | 370 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RWB6 Putative serine protease-like protein | 983 | 3e-104 |
| B9RUR9 Placental protein 11, putative | 835 | 5e-087 |
| A5AGJ0 Putative uncharacterized protein | 824 | 9e-086 |
| B8ASM0 Putative uncharacterized protein | 824 | 9e-086 |
| B9FGE4 Putative uncharacterized protein | 824 | 9e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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