 |
Information for unigene UN16976
| FASTA Sequence |
| Unigene ID: UN16976 | Length: 1179 |
SSR | | GCAAAAAGTCATATTTCATCTCAAAGTGAACACTTATTACACAACCTTGTCGCCACAACTTTATTCCTTACAGAGAACAAAACCTC
CTCAGAGAATCTTTTACAGAGAAATTGAAAAGTCTTTAAAAAAGCTGAAAACTTTACTTTCCAAGTACTGCGCAACGCGCTGGTCA
AGCAAAGGACCTTAAGCTCAAGAAAACTTTATTGGAGAAACATGAAAATGAAGTTCTTGTTTGTTTGTTTCAAATCCAACACGAAT
CAAAACTTATCAAGCTGATTTTGGTACATTGTCAGAGAGACTGAGATCATAGTCGTATTCTGCATCGCGAGCGTTCTTCTTGTAAA
GAAGCTTCTTGAAATCAGCCTCGTCCAAGTTCTTTGTGTTCTCTGCGGCGTGAACTTGAGCTAAGTTGGAGTAGTCAGCAGCCGAA
GTAGAGAAGAAGGCCTTTTCTTCTTCAGTCACCTTCCTCAGAAACCTAGCTGGATTCCCTCCCCAAACCTCGCCGGAGGGAATTCT
AGTGTTCTGCCTGACAAGAGCTCCTGACTCAACCACGGCATGCTTTTCAACATGAGCTCCATCCAAGACGGTAGCACTAGCACCAA
TATAGGCCTCGTCTTCGACAGTGCAGCCATGTAAAACAGCACTGTTACCAACAGTGACATTGTCTCCAATGAGAGTGGGCAAAACC
TTGCCGCTTAAGTTGGACTTAGCAACGTGGACGAGGGTGTTATCTTGGATATTGGTCCCAGCGCCGACGCTGATGCTGTTAGCATC
TCCTCTCAAGACGCAGCCATACCAAATGGAAGAACCACGTCCGACATGGACATTGCCAATGATAGAGGCGCTAGGAGCAACGAAAG
CCTGGTTATCGACAGCAGGGGATTTGTCAAAAACATTCATAAGCGTACGGTGCCTGGATAGTTGTTCACGGAAGTGATTTTTGCCT
TGGAGGCGACAACCGAGCCGATCGAGTGCTTGACCAGTTTCACGGATCCAGAACCCTACGCTGTAGAATGCCTTTCCCATCGACAT
CGTTTTTTTTCCACACGGCGGAGAGATCGTTTGTCAACGAAATGGAAATCCGAAAAGGGCTTCTTCTTCGCCGGAACTAGAGGAAG
ATGAGAGAGAGAGAACTAGTGTGACCTCGACGCTCAGATTCCTGGTTATTATCCGGTTCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABB45859 hypothetical protein [Eutrema halophilum] | 1179 | 6e-127 |
| NP_569036 gamma carbonic anhydrase 3 [Arabidopsis thaliana] | 1145 | 5e-123 |
| BAD43151 unknown protein [Arabidopsis thaliana] | 1014 | 8e-108 |
| NP_564091 gamma carbonic anhydrase 1 [Arabidopsis thaliana] | 1011 | 2e-107 |
| AAM61583 unknown [Arabidopsis thaliana] | 1009 | 3e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54JC2 Uncharacterized protein DDB_G0288155 | 449 | 1e-043 |
| Q9FMV1 Uncharacterized protein At5g63510, mitochondrial | 348 | 6e-032 |
| Q9SMN1 Uncharacterized protein At3g48680, mitochondrial | 346 | 1e-031 |
| Q57752 Uncharacterized protein MJ0304 | 310 | 2e-027 |
| P40882 Uncharacterized protein PA3753 | 310 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0ZR42 Putative uncharacterized protein | 1179 | 4e-127 |
| Q94AU7 Ferripyochelin-binding protein-like | 1145 | 4e-123 |
| Q682H9 Putative uncharacterized protein At1g19580 | 1014 | 6e-108 |
| Q9FWR5 F14P1.8 protein | 1011 | 1e-107 |
| Q8LF67 Putative uncharacterized protein | 1009 | 2e-107 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G66510.1 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase | 1146 | 2e-125 |
| AT1G19580.1 GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1); carbonate dehydratase | 1011 | 7e-110 |
| AT1G47260.1 GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase | 904 | 2e-097 |
| AT5G66510.2 GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase | 740 | 2e-078 |
| AT5G63510.1 GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1); carbonate dehydratase | 348 | 5e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
