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Information for unigene UN16980
| FASTA Sequence |
| Unigene ID: UN16980 | Length: 1236 |
| SNP | GGAGTCTCCTCCTCCTCCCCCTCCTCCTCTTCGTATCATTTGAATTGAAAAACCTCTTTCTTCCTCTGAGCCGAGCCGTCGCTTTG
CAGGAAAACCACCAGTCATGATGGAAATACGAACTCCGAAGACCCACAAAGCCAAGCGTGTACTCGAAAAGCGAGCTCCTAAGTTG
GTTGAGAACGGGAAGAAGACATTGATACTTCACGGAACAAAGACGAGCGCTACAGTTAGCTCTGTGTTGATGGAGCTGTACCGTTT
GAAGAAGGGAGGTGCCATCAAATACTCGAGGAGGAATGAGAACATTAGGCCCTTTGAGAGTGGAGGTGAAACCTCTCTCGAGTTCT
TCTCTCTCAAGACCGACTGTAGCATCTTTGTGTATGGATCTCACACAAAGAAAAGACCTGACAATCTGGTGCTGGGCAGAATGTAT
GATCACCATGTCTACGATCTTATAGAAGTTGGGATTGAGAACTTTAAATCTCTGCTTTCCTTTTCCTACGACAAGAAGATTGCACC
TCATGAAGGATCAAAGCCTTTTATTTGCTTTACTGGAGAAGGTTTTGACAATGTACCTGAGCTCAAGCAGCTTAAAGAAGTCCTCA
CTGATCTCTTTCGAGGCGAGGTTGTGGAGAATCTAAATCTTACTGGATTAGACCGTGCTTACATATGCACAGCGATATCACCTACT
AAGGTTTTTCTTACTCACTGCGCTATTAAGCTTAAAAAGTCAGGGACCATCGTGCCTAGGATAGAGCTTGTTGAAGTTGGTCCATC
CATGGACTTGGGTGATCCGTCGTAACCGTCTTCCAAACGAAGGCCTAAGGAAAGAAGCTATGAGATCATCTAAAGATAAGCCCAAG
AAGAAGGTGAAGAATGTTGATCAAAATGATGTGCTAGGGAAGTTAGGGAGGGTTTATATTCCTGAGCAGGAGGTTGGAAAAATTCC
ATTGGCTGATAAATCCAAAGGAGTGAAGAGAGAGCGAAGAGAGGGTAAGCTGAAGAAGAATAAGGAAGAAGGGTCTGCTTCCAAAA
AGCTAAAAGAATCTGAGTAACTCACAAAACCCACTGCATCAAACGACAGATGAGACGATTTTGCAATGTAACATGTGTGTCTTTTT
TTTCATGAGAATCTATTTCTAAATGTTTTATTATACGCTAATATTTATCAGAGACTGTTTTCTTTTGTTAAGTTCCTGCAGCCAAA
GAAGAGTATTATTACTAGTAGGAGTTGAAAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883440 brix domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1089 | 2e-116 |
| NP_566734 ribosome production factor 2-like protein [Arabidopsis thaliana] | 1066 | 8e-114 |
| AAM63614 unknown [Arabidopsis thaliana] | 1046 | 2e-111 |
| XP_002283513 PREDICTED: hypothetical protein [Vitis vinifera] | 929 | 6e-098 |
| XP_002528588 brix domain containing protein, putative [Ricinus communis] | 911 | 8e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LUG5 Ribosome production factor 2 homolog | 1066 | 4e-115 |
| Q9AWM9 Ribosome production factor 2 homolog | 880 | 1e-093 |
| Q9H7B2 Ribosome production factor 2 homolog | 527 | 1e-052 |
| Q9JJ80 Ribosome production factor 2 homolog | 527 | 1e-052 |
| Q2YDN6 Ribosome production factor 2 homolog | 520 | 7e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SRG9 Brix domain containing protein, putative | 911 | 5e-096 |
| A2WQN1 Putative uncharacterized protein | 880 | 2e-092 |
| Q0JMC9 Os01g0513800 protein | 880 | 2e-092 |
| B9IF35 Predicted protein | 873 | 1e-091 |
| C5Z0R9 Putative uncharacterized protein Sb09g024910 | 868 | 5e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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