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Information for unigene UN16983

FASTA Sequence
Unigene ID: UN16983Length: 1049  SNP
AAGCTATTAAAACTGTTGCCGTGCTTTAACAAATTTATTTAACATTGAAATTTTCACTTCGCTTGACTTTGTTTTACCAAACGTTT
AACCACATAGCAGCATATAGTAAAAAAAACTCGAAACATAAAGTCAGATATACACACAAATGTAAATCACATAGATGCCTTGGGTT
TATAAAATCCCATCACTGAAACTTCATCTTATCTGTGGCTTCTTTAGTTGTCACCTTGCCTCAGAATACGCAAAATGGTCAAGAAG
AGATTGAGGATATCCAAGTAGAGAGCCACCGATGCAAGGATGTATTCATCATATGTGAAACGCTTGATGAGATTGTCCGTATCATA
GACTATGTACCCGCAGAACACCAGCGCGCTGATTCCTCCATATATTGCAACAGAGGTCGGGCCAAGCGGGAAGAACATCTGCATGA
AGCTGGTCACCACAAGAATGATGAGGCTGGTGAAGAGAATGGGTCCAAGGAAGCTGAAGTCTTTTCCTTTCTTTGCAGCCCAGAAA
GTGTATGCGGTTAGAGATCCCACCACGGAGAATGTCAATATCAAGGCTTCAAGGACGATTCTTCCTTCAGTCATGGCACAGCTGAC
GCCAACGGTGAAGCTCAAAGAGATAGTGAAGAGGGCAAGGAGGATGAGGTTAACAGGATGCTTCTGGTGGTAAACGTGCAGAGGCC
AGATCAAGACGAAAGGGATGATGCAGAGGAAGAGGAGGAGTCCGGGAGATCCGGTAAGGAGATCGTTGACCGGAGGATTGAGGACG
ACGACGGCGGAGATAAGCGTGGTTAGGAGGAGCTGGGCGGAGAGAATCCCGTAGACCTTGCGGATGAATCCCCAGCGGAGCTGATT
CTCGCCGTAGCTTAGCCCAGGGTAAAGCGTCGCCTCTCCGCCTCCCATCTCCAAGTCGATATCCTTCCCGGCGGAGCGATCTACGC
CGCTCATGCTCACGCTCGCGTATCCGTACGGTTTCTCCATGGCTCTCAGGGAAACGGTCTTCGAGACAGATCTGGAGGAGGATTGA
TTTTTTTGGAAAACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870236 hypothetical protein ARALYDRAFT_493344 [Arabidopsis lyrata subsp. lyrata]12701e-137
NP_567466 BI1-like protein [Arabidopsis thaliana]12664e-137
AAL07001 AT4g15470/dl3775w [Arabidopsis thaliana]10684e-114
XP_002312729 predicted protein [Populus trichocarpa]9582e-101
XP_002314428 predicted protein [Populus trichocarpa]9457e-100

Swiss-Prot top hits (Blast detail)Scoree value
Q94A20 BI1-like protein12662e-138
Q9DA39 Transmembrane BAX inhibitor motif-containing protein 43664e-034
Q9HC24 Transmembrane BAX inhibitor motif-containing protein 43639e-034
O74888 Uncharacterized membrane protein C576.043639e-034
Q11080 Transmembrane BAX inhibitor motif-containing protein 43064e-027

TrEMBL top hits (Blast detail)Scoree value
B9HMA4 Predicted protein9581e-101
A9PF37 Predicted protein9455e-100
C6SY04 Putative uncharacterized protein8488e-089
C6TBY5 Putative uncharacterized protein8488e-089
B6TIY8 Putative uncharacterized protein8031e-083

Arabidopsis top hits (Blast detail)Scoree value
AT4G15470.1 EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: glutamate binding (TAIR:AT1G03070.1); Has 4000 Blast hits to 3999 proteins in 955 species: Archae - 0; Bacteria - 1775; Metazoa - 750; Fungi - 92; Plants - 143; Viruses - 77; Other Eukaryotes - 1163 (source: NCBI BLink).12671e-139
AT1G03070.1 glutamate binding6764e-071
AT3G63310.1 glutamate binding6496e-068
AT4G02690.1 glutamate binding6406e-067
AT4G14730.1 transmembrane protein-related6334e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  11%
 
81  6%
 
106  33%
 
98  44%
 
61  6%

Unigene MembersMember information