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Information for unigene UN17003
| FASTA Sequence |
| Unigene ID: UN17003 | Length: 1201 |
SSR | SNP | AGCCAACACCACTCACACACACAACTCTTGAAAGCACTCTCTTGTCTCTCTCTTGCTCACATTCATCCAACTCTCCAGGTATGTCT
ACATCCGAGAACAAAGTCGAAATAGTTGACAGAGCTCACAAGGAGGATGAAAAAGAAGAAGAAGAAGGTAAAGGTGGATTCCTAGA
CAATGTCAAAGGTTTCATTCACGGCATCGGCGAGAAGATACAGGGAACCGTTGGTTTCGGGAAGCCAACGGCTGACGTCTCAGCCA
TCCACATCCCCAAGATCAATCTCGAGAGAGCAGACATTGTCGTAGACGTGCTCGTCAAGAACCCCAACCCAGTCCCCATCCCTCTC
ATCGACATCGACTACCTGATCGACAGTGACGGGAGGAAACTCGTCTCGGGACTGATCCCCGACGCTGGAACCATCAAGGCGCATGG
AGAAGAAACCGTCAAGATACCGCTGACTCTGATCTACGACGACATCAAGAGCACTTACAACGACATCAACCCCGGGATGATCATAC
CTTACAGGATCAAAGTCGATCTCATCGTCGACGTGCCTGTCTTGGGGAGGCTCACGTTACCGTTGGAGAAACGTGGAGAGATCCCG
ATCCCGAAGAAACCTGATGTCGACATCGAGAAGATCCAGTTCCAGAAGTTTTCTCTGGAAGAGACGGTGGCGATACTCCACGTGAG
GCTTGAGAACTTGAATGATTTTGATTTGGGGGTTAATGACTTGGACTGTGAGGTGTGGTTGGCTGATGTGAGTATTGGGAAAGCAG
AGATATCTGACTCTGTAAAGCTTGATAAAAACGGGAGTGGGTTGATTAATGTGCCGATGACGTTTAGGCCAAAGGACTTTGGGTCT
GCGCTTTGGGATATGATACGTGGTAAAGGAACTGGGTACACTATTAAAGGTAATGTGGATGTTGATACACCGTTTGGAGGTATGAA
GCTTCCTATTATCAAGGAAGGTGGTGAGACTCGTCTGAAGAAGGAAGATGATGATGATGACGATGAGGAATAAGGAAAAGAGGTTA
AGAGAATGAGGGCTGAATCTCTGATGTTTAAAAATAATGTGTAAAAGTTAAATGAAAGACTTGTTTGTTGTGCTTTATGGTGGTGG
ATCAGACTTTTGAATAGAGCTGTGTCTGGACTTGTTATATCATCGTGGTCCGGTTTTATTGGTTATGTTTTGTTTAAACCGGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181934 Late embryogenesis abundant protein, group 2 [Arabidopsis thaliana] | 1481 | 6e-162 |
| XP_002880080 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1479 | 1e-161 |
| AAM64433 similar to late embryogenesis abundant proteins [Arabidopsis thaliana] | 1476 | 2e-161 |
| CBI24768 unnamed protein product [Vitis vinifera] | 1250 | 4e-135 |
| ABK95225 unknown [Populus trichocarpa] | 1245 | 1e-134 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82355 Desiccation-related protein At2g46140 | 204 | 3e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80576 At2g44060 | 1481 | 4e-162 |
| Q8LCW6 Similar to late embryogenesis abundant proteins | 1476 | 2e-161 |
| A9PFS2 Putative uncharacterized protein | 1245 | 1e-134 |
| B9T526 Late embryogenesis abundant protein Lea14-A, putative | 1245 | 1e-134 |
| C6T750 Late-embryogenesis abundant protein 2 | 1242 | 2e-134 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44060.1 late embryogenesis abundant family protein / LEA family protein | 1482 | 2e-164 |
| AT2G44060.2 late embryogenesis abundant family protein / LEA family protein | 1482 | 2e-164 |
| AT2G46140.1 late embryogenesis abundant protein, putative / LEA protein, putative | 204 | 3e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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