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Information for unigene UN17005
| FASTA Sequence |
| Unigene ID: UN17005 | Length: 1197 |
| SNP | GGATACAAAACGCTAGTCGTCGTCGGCTCTGTAACTCCCGTCGTCGACCCAATACGCCGTTGAAGCTAATTTAAGTGATGGAACCT
AACGGGTCAGCTTCATCGACTGAAAACGGCGTCGTAAATGACGTGGAGAAGTTTCTCTGCGAGCGATTGGTGGACCAGTCGCAGCC
CATCTCGGAGCGGTTCAGAGCTCTCTTCTCTCTTCGCAACTTGAAAGGCCCTGGACCTCGCAACGCTCTAATCCTCGCTTCCAGAG
ACTCATCAAACTTGTTGGCGCATGAAGCTGCGTTTGCGTTGGGACAGATGCAAGATGCTGAAGCGGTTCCTGCTCTAGAGTCTGTT
CTTAATGATATGTCTTTGCATCCAATAGTACGCCATGAGGCAGCAGAAGCTCTTGGAGCTATTGGTTTAGCGGGAAATGCTGAGAT
TTTGAAGAAGAGCTTGGTTTTGGATCCAGCTCAGGAGGTTAGGGAAACGTGTGAGTTAGCTCTCAAAAGGATTGAAGAGTTGAGTA
ATGTTGATGCGGAGAAGGAGTTAGGAGTTACGACAGAGACAGAGAGATCACCTTTCATGTCTGTTGACCCTGCGGCTCCAGCTGCT
GCTTTCTCTTCTGTACAGCAATTGAGGGAAATTCTTCTGGATGAAACAAAAGGCATGTATGAGAGATATGCTGCTCTCTTTGCTCT
AAGGAATCATGGTGGAGAGGATGCTGTTTCTGCCATAGTTGATTCTTTGAGTGCTAATAGTGCCCTTCTACGTCACGAGGTAGCTT
ATGTCTTGGGGCAACTGCAAAACAAAGCTGCATTAGCTACTCTAAGCAAAATACTTAGAGATGTGAACGAGCATCCCATGGTCAGA
CATGAGGCTGCAGAAGCACTTGGTTCTATTGCAGATGAGCAGAGCATCGCATTGCTACAAGAGTTTTTAAGGGACCCTGAACCGAT
TGTTTCTCAAAGCTGTGAAGTTGCATTGAGCATGTTGGAATTTGAAAATTTTGGCAAATCATTCGAGTTCTTTTTCACTCAAGACC
CACTTGTTCACTAAGAATGGTCAAGGATCATAACCATTCTTCTATCATTTACCAACCAAGGAACACAAACTTTTTTTTTTTAAAGC
TGAATGTTCACTAAGAATGCTCAAGGATCATAACCATTCTTCTATCACTTACCAACGAAGGAATACAAACTTTTTTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876460 hypothetical protein ARALYDRAFT_907292 [Arabidopsis lyrata subsp. lyrata] | 1372 | 3e-149 |
| NP_567062 deoxyhypusine hydroxylase [Arabidopsis thaliana] | 1366 | 1e-148 |
| CAB68156 putative protein [Arabidopsis thaliana] | 1271 | 1e-137 |
| XP_002263238 PREDICTED: hypothetical protein [Vitis vinifera] | 1189 | 4e-128 |
| XP_002302059 predicted protein [Populus trichocarpa] | 1184 | 2e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JW0 Deoxyhypusine hydroxylase | 1366 | 6e-150 |
| Q2QXB3 Deoxyhypusine hydroxylase-A | 1069 | 2e-115 |
| Q2QLW3 Deoxyhypusine hydroxylase-B | 1049 | 3e-113 |
| Q5ZIP3 Deoxyhypusine hydroxylase | 660 | 4e-068 |
| Q9BU89 Deoxyhypusine hydroxylase | 659 | 5e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGP9 AT3G58180 protein | 1366 | 9e-149 |
| B9GS37 Predicted protein | 1184 | 1e-127 |
| B9S4W3 Lyase, putative | 1167 | 1e-125 |
| B9H8J8 Predicted protein | 1158 | 1e-124 |
| C6TNQ0 Putative uncharacterized protein | 1136 | 4e-122 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58180.1 PBS lyase HEAT-like repeat-containing protein | 1367 | 4e-151 |
| AT3G62530.1 PBS lyase HEAT-like repeat-containing protein | 391 | 6e-038 |
| AT3G43260.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: PBS lyase HEAT-like repeat-containing protein (TAIR:AT3G62530.1); Has 43 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 138 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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