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Information for unigene UN17008
| FASTA Sequence |
| Unigene ID: UN17008 | Length: 1421 |
| SNP | GGAAACCAAAGAGTCAATAACTTCGGTTTAGAGATTTGATAAAACCGAAGAAGAAGAAAGCAACGCCTCCTCGTCCACTCCATTAA
ACCCTAGAGCTCAAGTCGTCGTCCCCTTTCAGTAAGTTTCGGCGCCATGGCTCCCAAAGACGAGAACTCTGTGAAGCTCTTCCTCA
GCATCGGCCTGGACGAGAAAACAGCCACCACTACCATCAACAACCCCAAGGTCACAGCTAATCTCACCGCCGTTATTCACGAGGCT
GGTGTAACTGATGGATGCGATCGAACTACTGGGAATCTGTTGTACACGGTCGCTACTAAGCACCATTCAAATCTTCGTCTGCATCG
TCCTACGTTGTTCGATTACATTGTTTCCTCCAAGATTAAAACTCCAGCGCAATTGGATGCTGCAGTTTCGTTTTTTGACAAGAACT
CTCCAGAGGATTTCAAGCTAAATGAGTTTGAGGAGGCGTGTGGTGTTGGGGTTGAAGTTTCTGCAGAAGATATCGAGAAAGCAGCT
GAAGAAGTTTTTGAAGAGCATAAGAGTGCAATATTGGAGCAGCGCTACCGAACTAATGTGGGTCAGTTGCTTGGACATGTCCGGAA
AAGTTTGCCATGGGCAGATCCTAAGATTGTAAAGGACGTCATAGACAGAAAAATGTATGAACTGCTTGGTGAGAAAACTGCTGCGG
ATAATGAAAAACCTACAAAAAAGAAGGAAAAGAAAGAGAAACCTGCTGCCAAAGCTGAGGAAAAGAAAGCTGCCGTGGAAGCCACC
CCAGAGCCATCAGAAGAGGAGCTTAATCCATATTCCATATTCCCTCAGCCAGAGCAAAATTTGATGGTTCACACAGAAGTCTTTTA
TAGCGACGGCTCTGTGCTCAAATGTAACAATAAGAAGGAAGTGCTTGATAAACATCTCAAGGTGACTGGAGGGAAGGTCTATACCC
GGTTCCCACCTGAACCAAATGGTTATCTACATATTGGACATGCAAAGGCTATGTTTGTCGATTTTGGTCTTGCAAAGGAGCGAGGG
GGCTGCTGTTATCTAAGATATGATGACACTAATCCCGAAGCAGAAAAGAAAGAGTACATTAATCACATTGAAGAAATTGTTAGCTG
GATGGGTTGGGAACCCTTCAAGATTACGTACACCAGTGATTATTTCCAAGAATTGTATGATTTGGCAGTCGAATTGATTCGGAGAG
GTCATGCTTATGTTGATCATCAGAATGCTGACGAGATAAAAGAGTACAGAGAGAAGAAAATGAATAGCCCCTGGAGAGACAGGCCT
ATTGAAGAATCTCTTAGACTTTTTGACGATATGAGGCGAGGAAAGATTGAGGAAGGGAAAGCAACTCTGCGAATGAAGCAGGATAT
GCAGAATGATAATTGCAATATGTATGACCTTATTTGCTATCGTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173906 putative tRNA-glutamine synthetase [Arabidopsis thaliana] | 1937 | 1e-214 |
| XP_002890694 hypothetical protein ARALYDRAFT_472840 [Arabidopsis lyrata subsp. lyrata] | 1923 | 4e-213 |
| NP_001185094 putative tRNA-glutamine synthetase [Arabidopsis thaliana] | 1859 | 1e-205 |
| XP_002526992 glutaminyl-tRNA synthetase, putative [Ricinus communis] | 1713 | 1e-188 |
| XP_002270305 PREDICTED: similar to Glutaminyl-tRNA synthetase [Vitis vinifera] | 1712 | 1e-188 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P52780 Glutaminyl-tRNA synthetase | 1660 | 6e-184 |
| P14325 Probable glutaminyl-tRNA synthetase | 972 | 3e-104 |
| Q9Y105 Probable glutaminyl-tRNA synthetase | 836 | 2e-088 |
| O62431 Probable glutaminyl-tRNA synthetase | 819 | 2e-086 |
| Q3MHH4 Glutaminyl-tRNA synthetase | 807 | 5e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W4F3 Putative uncharacterized protein At1g25350 | 1937 | 7e-215 |
| B9SLX3 Glutaminyl-tRNA synthetase, putative | 1713 | 7e-189 |
| B9HJ44 Predicted protein | 1685 | 1e-185 |
| B8ADM6 Putative uncharacterized protein | 1550 | 5e-170 |
| Q5VRX8 Os01g0185200 protein | 1549 | 7e-170 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G25350.1 OVA9 (ovule abortion 9); glutamine-tRNA ligase | 1937 | 4e-217 |
| AT5G26710.1 glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative | 318 | 2e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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