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Information for unigene UN17011

FASTA Sequence
Unigene ID: UN17011Length: 1000  SNP
GCAACCACTAATGTAGATGATTAAGTGTCTTATCAGATATGAGTCTATATAATTTGTTGCAAGAATCCTAAGTCGATGAATTGAAG
AAAAGTTCCCCTAAGATCATAAGCTTCCAGTTAACCTTAGTACAACATCATTTGAGTTCGTGCTAATCTTCATTTTGAGTTCTGTC
CTAAGACATATACATGTTCCACGAAACTCTTCACCTTGCATGCCTCTCTTCTCTGCCTTCAAGAGCATCAACTTCCTCATTTGTTA
GCATATCCACCATTGGTTCATAAAAATCCAAGTCTTTCCTTTTCCGAACTACACTGGACTTAAAGCTGAATAATTTCACTAAGTCC
ATTGACAAGCCAGCCTCTCGCTGAACCATAATCAGATCCTCTGCGGCTTTTCTTGCTTAACCTACTCTCCCTAGCTGAAGTTACAC
TTTGAACTGCAATCTCGTAAAGTTGTTCTCTGATGGCAAAGGCAACAGCAGGGCCAACTTCAGGATCTTCAACACCTAAATCCTTA
CACAAGGTTCTTGCAAATTCCTCAGGATCACTCTCAAAATTGTTTAGGTCCCACAAGAACTGATCCTTGATGAGGGTATGATTAAC
TCGGAGATCAAGCTTGATTGGTATGATCTTTTCACCAGTGTACATATCTTGTCCTTCATATGCTCTAAAATCTGCGAGCTGAGACT
GAATAGATTGAGAAATCTGAGTGTTGAACGCCTGTGGAAGTTTCAAGTCTTTAACAGTCCTTCTGGCGAAGACAAGGATCTCATTA
TCCGGGTCTGAAGGGTTCCAAGTGAAAGCGTCTTTGTAACGCTGACCCTCGAATTGAATGTCCAAACGGATAGGTACCAAGTTCTC
TGCAGTAGGCATCCTGAACTTGACGGGACCTTTCCAACCACTAGACCCTGAAGCCTTCATCCTTCTCAATTTTTTCACAGATTCGA
TTTTGCACAAAGGACGACGAGAGACGAAGAGAGTGGGGGAGTTTTCAATTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885217 hypothetical protein ARALYDRAFT_479235 [Arabidopsis lyrata subsp. lyrata]8972e-094
NP_566581 chromatin structure-remodeling complex protein BSH [Arabidopsis thaliana]8954e-094
AAB47766 SNF5 homolog BSH [Arabidopsis thaliana]8873e-093
NP_001189918 chromatin structure-remodeling complex protein BSH [Arabidopsis thaliana]8784e-092
ADH93593 SNF5-type chromatin-remodeling complex protein [Glycine max]8051e-083

Swiss-Prot top hits (Blast detail)Scoree value
P93045 Chromatin structure-remodeling complex protein BSH8952e-095
O42467 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 12222e-017
Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 12161e-016
Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 12151e-016
Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A2142e-016

TrEMBL top hits (Blast detail)Scoree value
Q2HIG1 At3g175908953e-094
A5X538 SNF57985e-083
B9HXC3 Condensin complex components subunit7449e-077
B9S028 Snf5, putative7412e-076
A9NKN6 Putative uncharacterized protein6435e-065

Arabidopsis top hits (Blast detail)Scoree value
AT3G17590.1 BSH (BUSHY GROWTH); chromatin binding / protein binding8952e-096

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  50%
 
62  25%
 
112  25%

Unigene MembersMember information