RadishBase

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Information for unigene UN17024

FASTA Sequence

Unigene ID:UN17024

Length: 665

GGAGAAAATAAAATAAAAGAGATCGGTCTGGGAGAAAGAAGCAAAGAAGAAAAATGGCAGCAACATTTGCAGCTCCATCGACAGTG
ATAGGTCTCGGAGGATCATCTGTTTCTCCCATCAAGGCCAAAGCTCTCTCTTCATCATTTATAAAACCAACAATAAGAGCAAAGAA
CCCTCTGAAAGTCGCCGGAGCATCGGGAGGAAGAGTCACTTGCTTTGAACAGAACTGGCTGAGGAGAGATCTGAACGTGGTGGGGT
TTGGTCTGATCGGATGGCTAGCTCCGTCGAGTATTCCGGCGATAAACGGGAAGAGCCTGTCGGGTCTCTTCTTCGAGAGCATAGGA
ACTGAGCTCGCTCACTTCCCAACTCCTCCTGCTCTCACTTCGCAGTTCTGGTTGTGGTTGATCACCTGGCACTTAGGTCTCTTCAT
CTGCCTCACCTTCGGACAAATCGGATTTAAGGGCAGGACCGAAGATTACTTCAAGAAATAAATCATCCATCTTATTCCATCTTTAC
TTATTATCTTACATCTCTCTCTTTGTTCTTCTCCGTGTAATATTATGAATCAAAACTTTCTTTCTTTCGGTTTTCTATATTTGATG
TTTCATACAATGTTTTTATTTTTTAAAACCAGATCGGACAGGTGATTGAACCGGATTCAACCT

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
BAJ33638 unnamed protein product [Thellungiella halophila]	671	2e-068
NP_563815 photosystem I subunit O [Arabidopsis thaliana]	660	3e-067
AAM97011 expressed protein [Arabidopsis thaliana]	660	3e-067
XP_002892455 hypothetical protein ARALYDRAFT_470899 [Arabidopsis lyrata subsp. lyrata]	652	3e-066
XP_002523852 conserved hypothetical protein [Ricinus communis]	599	4e-060

Swiss-Prot top hits	Score	E value
No hits found

TrEMBL top hits (Blast detail)	Score	E value
Q8L7C3 Expressed protein	660	2e-067
Q949Q5 Photosystem I subunit O	660	2e-067
B9SCY3 Putative uncharacterized protein	599	3e-060
B9MYU1 Predicted protein	594	1e-059
B9HQ34 Predicted protein	577	1e-057

Arabidopsis top hits (Blast detail)	Score	E value
AT1G08380.1 PSAO (photosystem I subunit O)	673	5e-071

EST library breakdown for ESTs in the assembly


7	6			9%


10	9			14%


11	6			9%


6	8			13%


12	9			14%


9	6			9%


15	1			2%


19	15			23%


8	1			2%


18	3			5%

Unigene Members