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Information for unigene UN17025

FASTA Sequence
Unigene ID: UN17025Length: 1337  SNP
GAAACAAGAACGTGTGAACGACTCAAAGGTGGGGGATCCATGCCGACATGGTTACGTCGTGGACTCGTGGTCGTCTCACGTGGTAT
TTACTATAGGACCCACTTGCTTGCGACTCCATTAATGGCTCCTCCCTTCCCTCAATTCTCCATGATCTGAGATTTTACTCACAGTC
TCTCATCGTCTCTTCTTCAGCTCCTCTTCTTCTCTGGTTTTTGGGGGTTTTAAGCATTTGCAATGATGGACCTAACGAAGCTGAAG
CCTCCACAGATCACTTTCTACTGCTCTGCCTTCTCCGTCTTCATCACAGTTCTGTTGACGTTACAGCTTGTATCTCAGCATCTCTC
TCACTGGAAGAACCCCAAGGAGCAAAAGGCGATCCTCATCATTGTTCTCATGGCTCCTATCTACGCCGTTGTCTCCTTTGTTGGGT
TGTTAGATGTCAAAGGAAGTGAAATCTTCTTCCTCTTCCTTGAATCCATCAAAGAATGCTACGAAGCACTCGTCATTGCTAAGTTC
TTGGCGTTGATGTATAGTTACTTGAACATTTCTATCAGCAAAAACATTGTCCCTGATGGAATCAAAGGAAGAGAGATTCACCATTC
TTTTCCTATGACTTTCTTCCAGCCTCATGTAGTTCGTCTGGATCATCGAACTCTTAGACTCTTGAAATACTGGACGTGGCAATTCG
TGGTCATCAGACCCGTGTGCTCCATCTTGATGATTGCTTTACAAATCATCGGGTTTTATCCTTCTTGGTTGAGCTGGACGTTCACT
ATCGTTCTCAACCTCTCTGTCTCTCTGGCGCTTTATTCACTTGTGGTATTCTACCACGTGTTTGCTAAGGAGCTTGCTCCTCACAA
TCCACTCGCAAAGTTCCTCTGCATCAAAGGGATTGTCTTCTTCTGCTTCTGGCAGGGGATAGCACTAGACATTCTGGTGGCAATGG
GAGTGATCAAGTCTCACCATTTCTGGTTGGAGGTGGAACAGATCCAGGAAGCTATTCAGAATGTGTTGGTATGTTTAGAGATGGTT
ATCTTCGCTGCGGTTCAGAAGCATGCTTATCATGTTGGTCCTTATAGCGGAGAGACCAAGCAGAAACTCGATAAAAAGACAGAGTG
ATATCTTGTCCCCCCCCGGTTAGAACGGGAAATCGACTGGTTTTTTTGTTCAGGTGTTTTGGAGACTTGAAACTTTTGCTTGTCAC
GATTGGGATAAGAGACGATAAAATAATGTTTTGAGATATCATCATCAGACAATAATGTTAAAAGTTAAAACCACCACACTATTTTC
TCAAGTTTTGTTTGGCAAACTCGTACTTAACACTGTTAAAATTATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34582 unnamed protein product [Thellungiella halophila]14736e-161
XP_002867839 hypothetical protein ARALYDRAFT_492722 [Arabidopsis lyrata subsp. lyrata]14333e-156
NP_193888 uncharacterized protein [Arabidopsis thaliana]14234e-155
XP_002521429 conserved hypothetical protein [Ricinus communis]12343e-133
CAN61223 hypothetical protein VITISV_038806 [Vitis vinifera]12022e-129

Swiss-Prot top hits (Blast detail)Scoree value
Q54WM0 Transmembrane protein 184 homolog DDB_G02795553782e-035
Q3TPR7 Transmembrane protein 184C3721e-034
Q9NVA4 Transmembrane protein 184C3658e-034
Q5RET6 Transmembrane protein 184C3658e-034
Q6GQE1 Transmembrane protein 184C3658e-034

TrEMBL top hits (Blast detail)Scoree value
O65422 Putative uncharacterized protein AT4g2157014233e-155
B9S610 Putative uncharacterized protein12342e-133
A5BCC1 Putative uncharacterized protein12011e-129
C5X9C4 Putative uncharacterized protein Sb02g03420011813e-127
B6TKI4 MAPK activating protein11662e-125

Arabidopsis top hits (Blast detail)Scoree value
AT4G21570.1 unknown protein14241e-157
AT1G11200.1 unknown protein11192e-122
AT1G23070.1 unknown protein2941e-026
AT1G77220.1 unknown protein2464e-021
AT4G38360.2 unknown protein2285e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  19%
 
84  25%
 
123  19%
 
75  31%
 
91  6%

Unigene MembersMember information