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Information for unigene UN17036

FASTA Sequence
Unigene ID: UN17036Length: 1176  SNP
ATATAAATAAGCAAACCTTGTATTACATTTTCAGTTTCTACAAGCATTTTGTACATTAGCAAATGGATAATCTGTAATTACACAAT
GAAGAGGGAAATGATAATGAGATATACAGGGAGATTACCCATTACAAATCGAAAATAGGAATATTTTGGGAACTGGTACTAATATA
AACAAATGCAAAGAGGGATTAGAGCTTTAAGCACTGAATCCACGGTGAAGAGAGCTCCAAGGACCAGGTGGGATTGAGGTGCAAGC
CTGTGAAGCTGCCTCTTCCATTTGCTCCATTTGGATCCTTTCGTTGCAGATGTTTGCAAAGGACCTCATGTGCTTGATACCGTACT
GTGACAGGGATCCACAGTGTCTCTCAAAAGCTCTCACCATGTTTTTAAGGCAGCTCCAGTCATCGGCCAGTGGTTGTCCAGCAGGA
CGTACTTTGTTTAGCACTTCAGAACCTTCTGAGATGCCAAACAAGAGTTTGCCGACGAGTTTCACACTGTTGTCAACGTGAAGTCT
GTGAGACATGGCTTCAAGGACTTGCTTCTGAGCTTCCGTTTTTCTGGTGGAACCTTCTGGTGCCTTTCGGTACTTATCCCAGAAAT
GGACAAGATCTGCATCACGCTGGTTTGTAACTCTTGAAGGTGGTGGCGTCAGTGAATTAGCATCCACAAAGGTGAAGTTGTCGTTG
GCAGGGTTTGTTCCCATGTAAAGGTCGAGCTTATTCTTGTTAAGTCCTACATCGCCGTATTGCATGACATGAGAACCATAACTCGA
CCCAGAACCTACAGTCCTCCTTTTCACAAGTTCATATTGTTGGCGCAGAGTCTCAGTTTGTAGATTGTGCACGCCACTGTCTTCCA
TCCAGGCAACACTGTATAAGTCACCTAAGCAAGTTTCATACTCAGGTGGAGGGCTAGGCTCCTCTCCGGGGCAATAGGTACCCCAA
CTGCTTTCTACTGCGTTCGATGCAGTTGTGGCGTAGATGTTTAAACCCTCTTCAAGAAGCCCTTCGAAGATACTTCCAGATTCACA
AGCTTCAAGATAAAACACCAAACTTTTGTAGTTTCCGGAAGAGTGTTTTTTCTTCAACACATCATTCAAATCATTAGCATATAAGT
AAGGAGAAGTCGGCATCCCGAGAACTCCAGGACCACCATGGTCACTGTAGAATATGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867219 GAMMA-VPE [Arabidopsis lyrata subsp. lyrata]15741e-172
BAJ33795 unnamed protein product [Thellungiella halophila]15604e-171
BAA18924 gamma-VPE [Arabidopsis thaliana]15481e-169
NP_195020 vacuolar-processing enzyme gamma-isozyme [Arabidopsis thaliana]15481e-169
XP_002880728 alpha-vacuolar processing enzyme [Arabidopsis lyrata subsp. lyrata]14493e-158

Swiss-Prot top hits (Blast detail)Scoree value
Q39119 Vacuolar-processing enzyme gamma-isozyme15521e-171
P49047 Vacuolar-processing enzyme alpha-isozyme14222e-156
P49043 Vacuolar-processing enzyme13746e-151
O24325 Vacuolar-processing enzyme13316e-146
P49044 Vacuolar-processing enzyme13002e-142

TrEMBL top hits (Blast detail)Scoree value
B9RRV3 Vacuolar-processing enzyme, putative14232e-155
A5BVL1 Putative uncharacterized protein14205e-155
Q7GAI8 Putative vacuolar processing enzyme14142e-154
B9INF9 Predicted protein14124e-154
D2D489 Vacuolar processing enzyme a14034e-153

Arabidopsis top hits (Blast detail)Scoree value
AT4G32940.1 GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase15531e-172
AT2G25940.1 ALPHA-VPE (alpha-vacuolar processing enzyme); cysteine-type endopeptidase14231e-157
AT1G62710.1 BETA-VPE (BETA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase9355e-101
AT3G20210.1 DELTA-VPE; cysteine-type endopeptidase7698e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  30%
 
102  20%
 
115  50%

Unigene MembersMember information