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Information for unigene UN17038
FASTA Sequence |
Unigene ID: UN17038 | Length: 1682 |
| SNP | GTGAAAGAGTTTTATGCAATACAAAACATAGAGGAGGCGGAAAGGCTTACTACATTCATTCATCCATCAACAACAATTACATCATT
ACACACAAGTCTTGCTGAACAAATAAAAATCAATAATTACCGGAATGGGTTCGGTTCCAAACGTGTGTGTGGCTTTCACGTTAAAA
TTATACATTCTTTTATACCAACAAAGAGTGATAGATAGATATATAAATATTTTTGTAAATAACTACAAAAGATGGGGAACCTAAAG
CGTGGGAGTGAGTAGCTTTAGAGTTTCTTGGGGAAAGTCATACCGCGGCCTCGGATAGAAAGAGAGGGTCCTTTGGCAGAGCTGAC
TACATTGGTATCAAGGTAGATGACTACCACAGTGATGTCATCGTGGAAATGCCTCCTCACGCCTCTCTCTATCTTCATCAGATCAG
AGTATCTCATTTCTCTCTTCTTCGCTGCCGCTTGCATTGCCATCTTCACCAGTCTACGTGCTATCCCGTTTCGTGGGTGGTTCTGA
ACGATGTCAACAGCTTCTTGGTTGCTAAGCTGTTCCCATAGTCCATCAGAAGCAAATATAAGAAACTGGTCTTGTGGTTGGAGCTC
ATGCTCTGTTATCGACGGTTCCCCACTCAAGATTGGTCTCTTGATCGGCTCTCTGAGTCTATACTTCGTGTACAACGGTTCCCTGT
TGAACTCCGCCTTCTTAAGATACATGTCTCCTATGGATCTAGATACCTGAATAAGGCCCTTAACGCGCCACACATTGTGCTTTAAC
ACGACGATATGCGAGTCATCCGGGTGCAAGGAGTGCATCTCCTGCCTAACAGACTCGATGCTCACATTATGTTCAGCTGAGAGCTG
AAGCGCAATAGCCTCACCAGTCGCCTTCATAGCCCTCCCAAGGACAGCACGTGAATCCCCAACGTTAGCTATGTAGAGCATCCCTC
CGCATATAACACCCACAAGGCAGCAAGACCCAACCGCTGCAATCAGTGGCTTAACCGGCCACTGCTTTGTCACAACCCCAAGAAAC
CCTTCTTCAGTAGCTTCATACGCCTTTCTAATCACATCCATAGACATACACCCCTGCTCCGCTGCAAACCTCTTTAAATGCTGAAA
GAGATGATCATTGACAAAGCGGGAGGTCTCAGGCCCCCCATGACCGTCATAGATTCCAATAAAAGTACCATAAGGACCAGAACCAG
AGTCAAGGGTACTCAAAGGGCCAGACTCGACTTGGCTCTGATCCTCGAGGAGATTGTTGGCCTGAACAACAGCCATAGAGAAGTCA
CCGAGTAGGCGCTGACCAGAGTCTTTGTACCAGAGGAGTCCATCATGTTTTCCAGTTGAATCAACGGACCTGCCCGATGATGAAGA
AGGCCACAGACAAGCGCTCAAAAGTTTCATCAAAGTTGTTATTAACATATCCCCCTCATGCCATCAGGGAAACCCTCTTTCTCTTC
CTCCACATCAGTCAAAGGCAATACAAGCAGATGTAACAGGGAGAAGTCAACAGATACGGAAGATGACGCTAATCAACGGGAACTCC
AGAATCGAGATTCAAAGCAATCTTGATCTTAGACAAGGGTTTTGTAGTGACGAGAGAGAAGATCAGAAAAGACACCTGATGAAGCT
TTACAAGAAAGAGAAGAAACGGTGGAGATCTGAAAGGATCGAAGTATC
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GenBank top hits (Blast detail) | Score | e value |
AAM19705 protein phosphatase 2c-like protein [Eutrema halophilum] | 1801 | 7e-199 |
NP_566949 putative protein phosphatase 2C 46 [Arabidopsis thaliana] | 1791 | 1e-197 |
XP_002876083 hypothetical protein ARALYDRAFT_485488 [Arabidopsis lyrata subsp. lyrata] | 1791 | 1e-197 |
NP_201409 putative protein phosphatase 2C 79 [Arabidopsis thaliana] | 1623 | 3e-178 |
XP_002327730 predicted protein [Populus trichocarpa] | 1557 | 1e-170 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SD12 Probable protein phosphatase 2C 46 | 1795 | 2e-199 |
Q9FKX4 Probable protein phosphatase 2C 79 | 1623 | 1e-179 |
Q5Z8P0 Probable protein phosphatase 2C 60 | 1460 | 1e-160 |
Q5PNS9 Probable protein phosphatase 2C 64 | 1426 | 1e-156 |
Q10S32 Probable protein phosphatase 2C 28 | 1418 | 8e-156 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8S2S5 Protein phosphatase 2c-like protein | 1801 | 5e-199 |
A9PFH7 Predicted protein | 1557 | 1e-170 |
B9SXA9 Protein phosphatase 2c, putative | 1552 | 4e-170 |
B9S5K3 Protein phosphatase 2c, putative | 1481 | 6e-162 |
B9H1K3 Predicted protein | 1470 | 1e-160 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G51370.1 protein phosphatase 2C, putative / PP2C, putative | 1796 | 1e-200 |
AT5G66080.1 protein phosphatase 2C family protein / PP2C family protein | 1624 | 9e-181 |
AT4G38520.1 protein phosphatase 2C family protein / PP2C family protein | 1426 | 8e-158 |
AT4G38520.2 protein phosphatase 2C family protein / PP2C family protein | 1426 | 8e-158 |
AT3G51370.2 protein phosphatase 2C, putative / PP2C, putative | 1302 | 2e-143 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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