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Information for unigene UN17038

FASTA Sequence
Unigene ID: UN17038Length: 1682  SNP
GTGAAAGAGTTTTATGCAATACAAAACATAGAGGAGGCGGAAAGGCTTACTACATTCATTCATCCATCAACAACAATTACATCATT
ACACACAAGTCTTGCTGAACAAATAAAAATCAATAATTACCGGAATGGGTTCGGTTCCAAACGTGTGTGTGGCTTTCACGTTAAAA
TTATACATTCTTTTATACCAACAAAGAGTGATAGATAGATATATAAATATTTTTGTAAATAACTACAAAAGATGGGGAACCTAAAG
CGTGGGAGTGAGTAGCTTTAGAGTTTCTTGGGGAAAGTCATACCGCGGCCTCGGATAGAAAGAGAGGGTCCTTTGGCAGAGCTGAC
TACATTGGTATCAAGGTAGATGACTACCACAGTGATGTCATCGTGGAAATGCCTCCTCACGCCTCTCTCTATCTTCATCAGATCAG
AGTATCTCATTTCTCTCTTCTTCGCTGCCGCTTGCATTGCCATCTTCACCAGTCTACGTGCTATCCCGTTTCGTGGGTGGTTCTGA
ACGATGTCAACAGCTTCTTGGTTGCTAAGCTGTTCCCATAGTCCATCAGAAGCAAATATAAGAAACTGGTCTTGTGGTTGGAGCTC
ATGCTCTGTTATCGACGGTTCCCCACTCAAGATTGGTCTCTTGATCGGCTCTCTGAGTCTATACTTCGTGTACAACGGTTCCCTGT
TGAACTCCGCCTTCTTAAGATACATGTCTCCTATGGATCTAGATACCTGAATAAGGCCCTTAACGCGCCACACATTGTGCTTTAAC
ACGACGATATGCGAGTCATCCGGGTGCAAGGAGTGCATCTCCTGCCTAACAGACTCGATGCTCACATTATGTTCAGCTGAGAGCTG
AAGCGCAATAGCCTCACCAGTCGCCTTCATAGCCCTCCCAAGGACAGCACGTGAATCCCCAACGTTAGCTATGTAGAGCATCCCTC
CGCATATAACACCCACAAGGCAGCAAGACCCAACCGCTGCAATCAGTGGCTTAACCGGCCACTGCTTTGTCACAACCCCAAGAAAC
CCTTCTTCAGTAGCTTCATACGCCTTTCTAATCACATCCATAGACATACACCCCTGCTCCGCTGCAAACCTCTTTAAATGCTGAAA
GAGATGATCATTGACAAAGCGGGAGGTCTCAGGCCCCCCATGACCGTCATAGATTCCAATAAAAGTACCATAAGGACCAGAACCAG
AGTCAAGGGTACTCAAAGGGCCAGACTCGACTTGGCTCTGATCCTCGAGGAGATTGTTGGCCTGAACAACAGCCATAGAGAAGTCA
CCGAGTAGGCGCTGACCAGAGTCTTTGTACCAGAGGAGTCCATCATGTTTTCCAGTTGAATCAACGGACCTGCCCGATGATGAAGA
AGGCCACAGACAAGCGCTCAAAAGTTTCATCAAAGTTGTTATTAACATATCCCCCTCATGCCATCAGGGAAACCCTCTTTCTCTTC
CTCCACATCAGTCAAAGGCAATACAAGCAGATGTAACAGGGAGAAGTCAACAGATACGGAAGATGACGCTAATCAACGGGAACTCC
AGAATCGAGATTCAAAGCAATCTTGATCTTAGACAAGGGTTTTGTAGTGACGAGAGAGAAGATCAGAAAAGACACCTGATGAAGCT
TTACAAGAAAGAGAAGAAACGGTGGAGATCTGAAAGGATCGAAGTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM19705 protein phosphatase 2c-like protein [Eutrema halophilum]18017e-199
NP_566949 putative protein phosphatase 2C 46 [Arabidopsis thaliana]17911e-197
XP_002876083 hypothetical protein ARALYDRAFT_485488 [Arabidopsis lyrata subsp. lyrata]17911e-197
NP_201409 putative protein phosphatase 2C 79 [Arabidopsis thaliana]16233e-178
XP_002327730 predicted protein [Populus trichocarpa]15571e-170

Swiss-Prot top hits (Blast detail)Scoree value
Q9SD12 Probable protein phosphatase 2C 4617952e-199
Q9FKX4 Probable protein phosphatase 2C 7916231e-179
Q5Z8P0 Probable protein phosphatase 2C 6014601e-160
Q5PNS9 Probable protein phosphatase 2C 6414261e-156
Q10S32 Probable protein phosphatase 2C 2814188e-156

TrEMBL top hits (Blast detail)Scoree value
Q8S2S5 Protein phosphatase 2c-like protein18015e-199
A9PFH7 Predicted protein15571e-170
B9SXA9 Protein phosphatase 2c, putative15524e-170
B9S5K3 Protein phosphatase 2c, putative14816e-162
B9H1K3 Predicted protein14701e-160

Arabidopsis top hits (Blast detail)Scoree value
AT3G51370.1 protein phosphatase 2C, putative / PP2C, putative17961e-200
AT5G66080.1 protein phosphatase 2C family protein / PP2C family protein16249e-181
AT4G38520.1 protein phosphatase 2C family protein / PP2C family protein14268e-158
AT4G38520.2 protein phosphatase 2C family protein / PP2C family protein14268e-158
AT3G51370.2 protein phosphatase 2C, putative / PP2C, putative13022e-143

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  10%
 
211  10%
 
72  20%
 
92  20%
 
62  20%
 
82  20%

Unigene MembersMember information