Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17041

FASTA Sequence
Unigene ID: UN17041Length: 1397  SNP
GGTTTGAAAGAAGAATTTTCTATTCATTGGACTACCATATCATAAACATCTTAATGCAATTGTGTTGAAATTCAAACAAGTATTAT
GCAACTTCCTAATTTTACATTAAACAATGCATACATAGTGGACTTTGGAACAAGTGTTATATACCATTCATATTCAGCATTTAAGC
AAATCTAAAATGCACACATGCATCATATTTAGGCATTTATACTTCATAAGTTTAAGGATTAAACTCTATACACAGAGTCCTGATCA
CAGTGGAGGTCTCTCCAACGAGATATAACCAAATTTGCCTTTGCGAAAATCCGAAAGTATTCTAAATGCAGCTTGATGACTATCTC
CACCAAACAAGTCTAGACCAAGCGTCTTCACAAATTTTTTACCGCAGCCTCCGTCAAGCTGAATCTTGTACCGGTTGTAAAGCGCC
CTCGAGCCTACTTCTGGAATCCGTGCTAGCATCTGCACAAGGATTCCAGCAACATCTGTGAAGTCATAAGCTTTCTCTCCAATGTC
GTCGCAAATCGCGAGCTTTATAGCAGCTGCTTGATCATCAATACGCATAGGAAGCATTCCTGGTGAATCTAACAGATCAAGACCAT
CCCCGAGCTTCACCCATTTCATTTCTCTAGTTACACCTGGTCTTGGTGCTGCTGCGCAGATCTTGCGCTTCAATAGACGATTGATC
AAAGATGATTTTCCAACATTTGGGTATCCGATGATTCCAGCTCTAACTGATCTAGGGAGAAGACCCTTCTCTCGCCGCTTTCCATT
TACATCACCAGCTAAGCTTTTTGCTAACCTACCTAGCTTCATAGCTCCCGTCCCAAGTTTGCCATTAGTGAAAATGACTTTTATTC
CTTGCTTTGCAAAGTATCTAGCCCAATCATTTCGATCATCATTAGAGATCATATCTTCTCTGTTCAACACCAATATTCTTTTCCTA
TTCCCAAGCCACGCATCCATCTTTGGATGAGTTGTGGATAAGGGAATCCTAGCATCTCTGACTTCAATCACAACATCCATCAGCTT
AAGCTGTTCCCTAAGTTCCTTTTCAGTTTTCATTATGTGTCCTGGATACCATTGAACAGGACGTAACGCTCTAGTCCATAGACGAA
TATCAGATTCAAGATTCATCCAATCAATTTCCTCTTCGTTTGGCTCTAACGTGAAACCCTTTGAATCATTCTTCCTTGTAGCATCT
AAAGTTGAATCCTTTCCTCCAATAATCTGAATTGGTGGACGAGAGGAGTTTGCAGTGGGAGGAGAAGCGGAGACTGCGAGTGTGGA
GTGTCGGAAGGTACGACGGTGAACGACGAAGTGGCTTAGGTTCGCCGGAGAAGGAGACGGCGATGGGGCTAACTGGGCAAACATGA
CTGACTGAAAATGCATTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874896 GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]17837e-197
NP_192188 GTP-binding protein [Arabidopsis thaliana]17829e-197
AAL38787 unknown protein [Arabidopsis thaliana]17774e-196
AAD15335 hypothetical protein [Arabidopsis thaliana]17684e-195
CBI32331 unnamed protein product [Vitis vinifera]12381e-133

Swiss-Prot top hits (Blast detail)Scoree value
O31743 Ribosome biogenesis GTPase A4429e-043
Q9BT17 Mitochondrial GTPase 12725e-023
Q4PS77 Mitochondrial GTPase 12555e-021
O14236 Nucleolar GTP-binding protein 22555e-021
Q8R2R6 Mitochondrial GTPase 12261e-017

TrEMBL top hits (Blast detail)Scoree value
Q8H1F6 Putative uncharacterized protein At4g0279017826e-197
Q8VZ29 Putative uncharacterized protein At4g0279017772e-196
Q9SY04 Putative uncharacterized protein AT4g0279017683e-195
A9PEM5 Putative uncharacterized protein12333e-133
B9H886 Predicted protein12333e-133

Arabidopsis top hits (Blast detail)Scoree value
AT4G02790.1 GTP-binding family protein17833e-199
AT2G41670.1 GTP-binding family protein2743e-024
AT1G52980.1 GTP-binding family protein1847e-014
AT3G07050.1 GTP-binding family protein1595e-011
AT1G08410.1 GTP-binding family protein1157e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  17%
 
114  17%
 
68  33%
 
92  8%
 
125  21%
 
71  4%

Unigene MembersMember information