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Information for unigene UN17046

FASTA Sequence
Unigene ID: UN17046Length: 2095  SNP
GGAGGGGCGTTACAGATGATTTCTCGGATTGACCCCTAGGGAGAAAACAAAAGAGCTATGATTATTAACGAATCGTAAATCAAATT
CGAATCCGAAAACTCATCGGAGCTTTGTTTTTCTCCGTCGTTCGGAGCTGAAATCGATCTCTCATCTTTGTGCCGGCTCAGTTTCA
GAGGAAGAGCTGATATGGATTGGGACAACGTAGCAGCTGAGGATGTGATCGAGGCGCTGAGAGAAGTCGAATGGTCGACGCCTCCT
CGTTCCTTTGGAGAGTTCTTCTCTAGATTCGCTTTCCCTCGCTCTTTCTCTAAGTGGAAGAGCCGTCTCAAATGCAATCTCTACTA
TTATCGGACGAATTACTTTATCCTGGTGATTTTCGTTCTAGGTCTTGCTTTGATTACAAGACCATTGGCTATTGTGGGTGCTGCGT
TTACGGCCTTAAGCATAGCTTTCCTTAACGACAGTTTTGCGGCTACTTTTAATGAGAAGTGTATAAGGACTATTAGGCTTTTCTCT
CCACACTTGGCCGCAAAAATGAGGCCTCCCCACATGCCAGTCATCCGTGGGAGATCAGCGGCAAGAAAGACAGTATACGTCTGTGG
CAAACCACGATGGGTCTTTGTCGTCATTTTCCTGACAGCCAGTCTTGTCATGTGGTTTTCTTCCTGCGGCTTGTTGTGGGTCCTCT
ATGCACTTCTCACTTCCCTCATCGTGGTTATAGTTCATGCAAGCGTGAGAACACCAAATCTCAAGGCACGATTAAACACATTCCGT
GAAGAGTTTCGGGCTGTCTGGCGTAACTACAGTGAACTTTAAGTCACAGTTCGTTACACTATCTAAAAGCAAACCGAGCAGCCATC
ATGTTGTCAAGTAACCATGGTCGCAGTTTCTTCTCGTCTCTTTTCGAGTTAATCTGAAGGTGAACATACCTTTGTGTTTGTCTGCA
TGATGCAGATACATACAGAACAGATTCACTTGACCAAGTTACTTTGATTGCTGTAGTGATGCTTATACTTTTCAGACTGTGTTAGT
GATTTACTCTTTTTATTATAGAAGCAGCATAATCTTTACCTGAATTATAATATTTCAATCATCTCTTCCCATCATTTGTATCTGTT
ATACAAACGGGTGCATTGATTTATTTATTTAGAAAATTGCAAATGTGAGAATATTATTAATAACAAAGGCAAACAAGACGGATGGG
AAGAAACCACACGAACGAGTTCTTGTTTTATTATTAGTAAAAGTTGCGATGAGAGTTTTTGACTATATGGTGTAACTGAAGCCGTT
GACTGTGAATCCTCCGTCAACAGAAATGACCTGACCGGTGATGTAAGAAGCTGCGGGAAGGCAGAGAAAAGCAACCAGCGACGAGA
CTTCCTCTGGTTCTCCAACGCGCCCAAGTGGGGTACGCGAAACCACCGCCTCCTCAAAACCTTTCTTCTCAAGTAGCGGTTTCACA
AGTGAGGTCTTGATGTACCACGGCGCCACGCAATTGGTTCTGATGTTGTCCCCTGCCCATTCGCAAGCTAGGTTCCTTGTAAGCTG
ATTAAGTGCTCCTTTAGTTGCACCATAGACAGATCCACTACTAAGATGAACCAGTCCAGCCACAGAGGAGATGAACACAATGCTAC
CAACCCCAGATGCTTTTAAAAGAGGATGTGCAATTTGGGAAAAATGGAAAGCGGATTCCAAGTTGATCGACATGATTTTAGCATAA
TCCTCACTCGTGTACTCCACTGTTGGTTTCCTTATATTAGTTCCAACATTGTTTATAAGGATGTTGAGCTTGCCGCTAAAGGCAGA
CGAAACTTCCTCGATCAACTTCTCCCTCTGATCTCTATCCGAAGCATCGCAAACCGAACCGGTTACCACTAAACCATTGGACTTCC
AATCATCCAAGCATGATTTGAGCTCGTCCTGGTTCCTTGAACATGTGTGAACTGTTGCACCGAATCTCGCTAGCTCCTCCACTACC
GCTCGCCCAATTCCGCGAGTACCACCGGTTACCAGAGCGGTTTTTCCGGCGAGGGACCATCTTTTGTTATTCTCCATCGTCAATCT
CCTCCACACAATCACACTGTGAGTGAAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196225 tropine dehydrogenase [Arabidopsis thaliana]12159e-131
XP_002873234 hypothetical protein ARALYDRAFT_487407 [Arabidopsis lyrata subsp. lyrata]12122e-130
AAM61117 short chain alcohol dehydrogenase-like [Arabidopsis thaliana]12061e-129
NP_850778 PRA1 family protein A2 [Arabidopsis thaliana]10411e-110
XP_002871193 prenylated rab acceptor family protein [Arabidopsis lyrata subsp. lyrata]10331e-109

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWC3 PRA1 family protein A210415e-112
Q8W115 PRA1 family protein A39539e-102
Q9ASX2 Tropinone reductase homolog At1g074408793e-093
P50165 Tropinone reductase homolog7915e-083
P50162 Tropinone reductase 17621e-079

TrEMBL top hits (Blast detail)Scoree value
Q9LHT0 Putative short chain alcohol dehydrogenase12156e-131
Q8LFZ4 Short chain alcohol dehydrogenase-like12067e-130
B9HML1 Predicted protein10175e-108
B9SDZ5 Tropinone reductase, putative9997e-106
C5WQ28 Putative uncharacterized protein Sb01g0398809494e-100

Arabidopsis top hits (Blast detail)Scoree value
AT5G06060.1 tropinone reductase, putative / tropine dehydrogenase, putative12153e-133
AT5G05987.1 PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)10424e-113
AT3G11397.1 PRA1.A3 (PRENYLATED RAB ACCEPTOR 1.A3)9546e-103
AT2G29350.1 SAG13; alcohol dehydrogenase/ oxidoreductase8972e-096
AT2G29360.1 tropinone reductase, putative / tropine dehydrogenase, putative8963e-096

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  17%
 
911  37%
 
102  7%
 
79  30%
 
83  10%

Unigene MembersMember information