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Information for unigene UN17048

FASTA Sequence
Unigene ID: UN17048Length: 1125 SSR 
GGATTATTCATCTGCGCCGCCTTCTCTCCCTCTCTCAGATTGATTCCTCCCAAAATCAACCCTTCTCCCCCGAAGTTAATTTCAGT
AGCAATCATGGCTGACGAGAATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGAACTCGCACCCTTTGACCCAACCAAGAAGAAGA
AGAAGAAGAAAGTTGTCCTTCAAGATCCCATCGAGGAACCTACTGAGTCACCGGCCGAGCCATCTGATTCATTGCCTGCTAATGAT
GGTGGCCTTGACGGTCCATCTTTCGGAACCAAGAAGAAAAAGAAGAAGAAGCCTGTTGAATCAAGCTCATTGGATGAAGAAACTGC
TGATGCTCCAGAAGATTTGGAGGAGCATCCCAATGAAGAGGAAGATGCAGAAGGAATTGATTTGCAGCAGCAGCAGCAGCAGCAAC
GTTATCCCTGGGAGGGAAGTGATAGGGATTACATATATGACGAGCTTCTTGGTAGAGTCTTTAACATTCTCCGTGAAAACAATCCG
GAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCCCAAGTTCTTCGTGAAGGGACAAAGAAGACAGTGTTTGTCAACTT
TATGGACCTTTGCAAGACGATGCATCGTCAACCAGACCATGTGATGAATTTCTTGCTTGCTGAGTTGGGAACAAGTGGTTCGCTTG
ATGGGCAGCAAAGATTGGTTGTCAAGGGAAGATTTGCACCCAAGAATTTTGAGGGGATTTTGCGTCGTTATGTCACTGAGTACGTC
ATTTGCCTTGGTTGCAAGAGCCCGGACACAATTCTCTCAAAGGAGAATCGTCTCTTCTTTTTCAGATGCGAGAAGTGTGGATCTGG
ACGATCTGTGGCGCAGATCAAAGCTGGTTTTGTTGCTCGTGTTGGTCGCAGAAAGACTTGAGGAATTGGACGGTGAACTGAGTGGT
CTTTTTGTTTTGGGAAACTACAGAGCGTTATGCAGTTGAAATACTTGTGTTGTTTTTTTGTTATTGTTTCTGAATATGAGCAAATA
ATCTGGAGACTAAGATTTCACATCAAATATGATCGGAACCTTCTACTTTGTTAGATCACGTGGGTCACTTAAATTCATGGAGTTTT
TTTGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974817 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]10749e-115
CBI15806 unnamed protein product [Vitis vinifera]10684e-114
NP_197592 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]10641e-113
AAK29672 protein synthesis initiation factor eIF2 beta [Arabidopsis thaliana]10641e-113
XP_002874023 protein synthesis initiation factor eIF2 beta [Arabidopsis lyrata subsp. lyrata]10641e-113

Swiss-Prot top hits (Blast detail)Scoree value
Q41969 Eukaryotic translation initiation factor 2 subunit beta10645e-115
P55871 Eukaryotic translation initiation factor 2 subunit beta9939e-107
O24473 Eukaryotic translation initiation factor 2 subunit beta9444e-101
Q5E9D0 Eukaryotic translation initiation factor 2 subunit 26102e-062
P20042 Eukaryotic translation initiation factor 2 subunit 26102e-062

TrEMBL top hits (Blast detail)Scoree value
Q3E987 Putative uncharacterized protein At5g20920.210746e-115
B9I766 Predicted protein10513e-112
A9PI50 Putative uncharacterized protein10478e-112
C6TAV3 Putative uncharacterized protein10316e-110
C6TP03 Putative uncharacterized protein10244e-109

Arabidopsis top hits (Blast detail)Scoree value
AT5G20920.2 EIF2 BETA; translation initiation factor10833e-118
AT5G20920.1 EIF2 BETA; translation initiation factor10717e-117
AT5G20920.3 EIF2 BETA; translation initiation factor10717e-117
AT3G07920.1 translation initiation factor5108e-052
AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein3655e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  13%
 
811  69%
 
122  13%
 
61  6%

Unigene MembersMember information