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Information for unigene UN17055

FASTA Sequence
Unigene ID: UN17055Length: 871  SNP
AAATGGCAAACACTTTGGCATTCATTTAAGTTCCAGTTCCAAGAGGACATGCTTAAGCCACAGAGATCTAAATGTACAAAATCCCA
AGGAATAAAAGACTCCTTGAGAAAAAGCAAGAGTGGGACTGTTCCATCTAACTAACTAACCATCTTAGATAACTTTCTTCTTCTCC
AGAAACGTCTTCAAGTGCATAAACTGCATTCCAGCGACTCCTAAGCATACGAAAAGAGAGAGGAAACTCAACCAAGCCATTTTAGA
GATTGTAGCCCTGTTCAGATTCTGCATCTCTTCCTCCCTGTCTCTGAGATAAAACATCTCATCATGAATCGTATTGACGGTTTCAA
TCAGTTGCTTAACCTCAAACTCCATAACTTCGACTTGACTCTTCTTGGCGACACTACTCCAGCTTTTGGAATGAATACCCGTCCTC
CAATCAAAATCGATACTCAACGTCACCTCAGGCTTATGACCGTTGGCAGTGAAACAAGCCATGTAGTCTCCAGCTTCAACCGCCGT
GAACGCGAACTGTCCCGAGTCCACATCTTCCGCGTGATGAAACGTGTTCCCGTAACTCGATGTCACCCTTATGGAGATCTTGTGAG
AGGGAGGAGAAGGGTGAGCCTCGTCGGGTTTGACGACGGTGTATTTCCCGACGGTCATTGAATTGCTTTTGATGTCTTCCGATATA
CATTTTGTTCGGCCTGATCGCAGTTCGAAGTGGAGGGACTGAGATACGCCGGAGAGAATCGCTAGGGTTAACAGGAACGTCCAGGT
GTTTTCTGATCGGAGAACCATGGCGGAAACTTCAAAGACAGAGAGAGATAGAACTTTCTGTTTTTTTTTTGCTTCCCTCTCAATCG
TCGGAAGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890648 predicted protein [Arabidopsis lyrata subsp. lyrata]9634e-102
NP_564256 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana]9572e-101
AAM67291 unknown [Arabidopsis thaliana]9492e-100
NP_177105 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana]8462e-088
XP_002888720 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata]8362e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q9D1D4 Transmembrane emp24 domain-containing protein 102615e-022
Q5E971 Transmembrane emp24 domain-containing protein 102543e-021
Q28735 Transmembrane emp24 domain-containing protein 102491e-020
Q63584 Transmembrane emp24 domain-containing protein 102472e-020
P49755 Transmembrane emp24 domain-containing protein 102453e-020

TrEMBL top hits (Blast detail)Scoree value
Q9LQY3 T24P13.79571e-101
Q8LFL9 Putative uncharacterized protein9491e-100
Q8VY92 Putative uncharacterized protein At1g694608461e-088
Q9C791 Putative uncharacterized protein8163e-085
Q8GWZ7 At1g266907715e-080

Arabidopsis top hits (Blast detail)Scoree value
AT1G26690.1 emp24/gp25L/p24 family protein9587e-104
AT1G69460.1 emp24/gp25L/p24 family protein8475e-091
AT1G14010.1 emp24/gp25L/p24 family protein7534e-080
AT2G03290.1 protein transmembrane transporter6656e-070
AT3G29070.1 protein transmembrane transporter5804e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  30%
 
191  10%
 
83  30%
 
112  20%
 
201  10%

Unigene MembersMember information