RadishBase

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Information for unigene UN17056

FASTA Sequence

Unigene ID:UN17056

Length: 1098

GGGTGAAGGAAGAATCGTTCCCCCTCTCCCCTCATCATTTTCTAGTGTTAACTTGCGCGTGGTATCCTATCGTGCACAGCGAAGAA
GACGAAGACGAAGAAGAAGCAGGGAGAAGAGGGAATCTAAATCGAGGAGTGGCGCATTTTAGCCGTCCTTAGCTCCGATTACATCG
GTTTCTTCTCTGTTTCCTTTCATCCGAATCATCCTCGATGGCTGCTCCACCTGCTAGGGCCAGAGCTGATTACGACTATCTCATCA
AGCTTCTTTTGATTGGAGATAGCGGTGTGGGTAAAAGTTGTCTGCTTCTACGTTTCTCTGATGGCTCCTTCACCACTAGCTTCATC
ACCACCATTGGCATTGACTTTAAGATCAGAACCATTGAGCTTGATGGCAAACGTATCAAGCTCCAGATTTGGGACACTGCTGGTCA
AGAACGCTTTCGCACCATCACCACCGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTCTATGATGTCACCGACGAGTCCTCCT
TCAACAACATTAGGAACTGGATTCGTAATATTGAACAGCATGCTTCAGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGAC
ATGGACGAAAGCAAGAGGGCGGTTCCTACAGCAAAGGGTCAGGCTCTCGCTGATGAGTACGGGATTAAGTTCTTTGAAACTAGTGC
TAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCCATAGGGAGGGACATAAAGCAGAGGCTTTCTGACACTGACTCCAAGGCTG
AGCCTGCGACGATCAGGATAAGCCAGACTGACCAGTCAGCTGGAGCCGCGCAGGCCACACAGAAGTCTGCATGCTGTGGAAGCTAA
TAAGAAAAAAATATAAAAATTGAAGTTTTAAGTGAAAAAAAAAACTAAGATGTCGTCAGCTTGGGTGCTTATGTAATTTTTTTTTT
TGTTTTATCCTCCAACATGTCTTGATTCCTTCTAAATTGCCTTTTCTTATTCTTATGTTTCCATTGCTTTGCTCTTTTAATTTAAT
CCCTAAACTTCTAAGATTTGTCTACTTATCTTACGAAACCATTAAAGCGACAGATTCAGCAAATGC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
BAJ34629 unnamed protein product [Thellungiella halophila]	1083	7e-116
NP_190192 Ras-related protein ARA-3 [Arabidopsis thaliana]	1080	2e-115
NP_200792 Ras-related protein Rab-8A [Arabidopsis thaliana]	1062	2e-113
XP_002866353 hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp. lyrata]	1057	8e-113
AEA92304 Rab2 [Hevea brasiliensis]	1050	5e-112

Swiss-Prot top hits (Blast detail)	Score	E value
P28186 Ras-related protein ARA-3	1080	7e-117
Q39433 Ras-related protein RAB1BV	976	8e-105
P20790 Ras-related protein Rab-8A	740	2e-077
P20791 Ras-related protein Rab-8B	733	1e-076
P36861 GTP-binding protein yptV2	704	3e-073

TrEMBL top hits (Blast detail)	Score	E value
Q9FJF1 Putative GTP-binding protein ara-3	1062	1e-113
Q8W3J3 Ras-related protein RAB8-3	1046	1e-111
A5C254 Putative uncharacterized protein	1039	6e-111
A9P9D8 Predicted protein	1039	6e-111
Q41024 Small GTP-binding protein	1039	6e-111

Arabidopsis top hits (Blast detail)	Score	E value
AT3G46060.1 ATRAB8A; GTP binding	1081	5e-118
AT3G46060.2 ATRAB8A; GTP binding	1081	5e-118
AT3G46060.3 ATRAB8A; GTP binding	1081	5e-118
AT5G59840.1 Ras-related GTP-binding family protein	1063	6e-116
AT3G53610.1 ATRAB8; GTP binding	1033	2e-112

EST library breakdown for ESTs in the assembly


9	4			25%


12	3			19%


6	3			19%


19	1			6%


20	2			13%


11	2			13%


8	1			6%

Unigene Members