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Information for unigene UN17056

FASTA Sequence
Unigene ID: UN17056Length: 1098  SNP
GGGTGAAGGAAGAATCGTTCCCCCTCTCCCCTCATCATTTTCTAGTGTTAACTTGCGCGTGGTATCCTATCGTGCACAGCGAAGAA
GACGAAGACGAAGAAGAAGCAGGGAGAAGAGGGAATCTAAATCGAGGAGTGGCGCATTTTAGCCGTCCTTAGCTCCGATTACATCG
GTTTCTTCTCTGTTTCCTTTCATCCGAATCATCCTCGATGGCTGCTCCACCTGCTAGGGCCAGAGCTGATTACGACTATCTCATCA
AGCTTCTTTTGATTGGAGATAGCGGTGTGGGTAAAAGTTGTCTGCTTCTACGTTTCTCTGATGGCTCCTTCACCACTAGCTTCATC
ACCACCATTGGCATTGACTTTAAGATCAGAACCATTGAGCTTGATGGCAAACGTATCAAGCTCCAGATTTGGGACACTGCTGGTCA
AGAACGCTTTCGCACCATCACCACCGCTTATTACCGTGGGGCAATGGGCATTTTGCTGGTCTATGATGTCACCGACGAGTCCTCCT
TCAACAACATTAGGAACTGGATTCGTAATATTGAACAGCATGCTTCAGATAATGTTAACAAGATCTTGGTAGGGAACAAGGCTGAC
ATGGACGAAAGCAAGAGGGCGGTTCCTACAGCAAAGGGTCAGGCTCTCGCTGATGAGTACGGGATTAAGTTCTTTGAAACTAGTGC
TAAGACAAACCTAAACGTGGAAGAAGTTTTCTTCTCCATAGGGAGGGACATAAAGCAGAGGCTTTCTGACACTGACTCCAAGGCTG
AGCCTGCGACGATCAGGATAAGCCAGACTGACCAGTCAGCTGGAGCCGCGCAGGCCACACAGAAGTCTGCATGCTGTGGAAGCTAA
TAAGAAAAAAATATAAAAATTGAAGTTTTAAGTGAAAAAAAAAACTAAGATGTCGTCAGCTTGGGTGCTTATGTAATTTTTTTTTT
TGTTTTATCCTCCAACATGTCTTGATTCCTTCTAAATTGCCTTTTCTTATTCTTATGTTTCCATTGCTTTGCTCTTTTAATTTAAT
CCCTAAACTTCTAAGATTTGTCTACTTATCTTACGAAACCATTAAAGCGACAGATTCAGCAAATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34629 unnamed protein product [Thellungiella halophila]10837e-116
NP_190192 Ras-related protein ARA-3 [Arabidopsis thaliana]10802e-115
NP_200792 Ras-related protein Rab-8A [Arabidopsis thaliana]10622e-113
XP_002866353 hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp. lyrata]10578e-113
AEA92304 Rab2 [Hevea brasiliensis]10505e-112

Swiss-Prot top hits (Blast detail)Scoree value
P28186 Ras-related protein ARA-310807e-117
Q39433 Ras-related protein RAB1BV9768e-105
P20790 Ras-related protein Rab-8A7402e-077
P20791 Ras-related protein Rab-8B7331e-076
P36861 GTP-binding protein yptV27043e-073

TrEMBL top hits (Blast detail)Scoree value
Q9FJF1 Putative GTP-binding protein ara-310621e-113
Q8W3J3 Ras-related protein RAB8-310461e-111
A5C254 Putative uncharacterized protein10396e-111
A9P9D8 Predicted protein10396e-111
Q41024 Small GTP-binding protein10396e-111

Arabidopsis top hits (Blast detail)Scoree value
AT3G46060.1 ATRAB8A; GTP binding10815e-118
AT3G46060.2 ATRAB8A; GTP binding10815e-118
AT3G46060.3 ATRAB8A; GTP binding10815e-118
AT5G59840.1 Ras-related GTP-binding family protein10636e-116
AT3G53610.1 ATRAB8; GTP binding10332e-112

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  25%
 
123  19%
 
63  19%
 
191  6%
 
202  13%
 
112  13%
 
81  6%

Unigene MembersMember information