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Information for unigene UN17082
| FASTA Sequence |
| Unigene ID: UN17082 | Length: 798 |
| SNP | CCTCTGAACAAAAGAAAACTTTATTTTACCCTTAATATAAGGTCAAATATGAGCTAATAATAAATCCGGTTAACAATCGGAAAACC
AGGTAATTCCAGGTTTTTTCTCAAAAGAAATTGGTGAAAAACAAAGAGAAGATCACGGTGGTGACTCCATAACCAGCGAGCTTGTT
CCCAGCTGCGGTGTCTTTTCCTTTGTTTCCTGGAGGAGGTAAAGAGGCCTTTGGCGATGAAGCTCCAGTACCGGAACAAGCGGAGA
GATCGGTGGTGACGTCACATCGACGGCTGAGATTGAGAGCTTGTTCAGTAGAGACGTTGAACCCAGAGAGCAAACCAGGAGTGTTG
TAGACGGTGCAGAGACATTGAAGCTCATCTTTCACCGCTTCCTTGATCGAGTCACAGCATTCCTTTGGTGGCCTCGTCGTCGTCGT
CAGAGCACTGAAGCAGGGGACTAGCTTGTTCACGCAAGTAGTAGCCGTTTGCGCTTCCACCTCCGGCAACGAAACCAAAACCATCG
CCGTCATGGCCGCCGCAAAGATCATCGTTGCAGTTGAGAAACGCACCATTTCTTCTCTCTCTTTTTCTTACGGAGGTCCGTGTTTT
TGTTTTGTTCTTTTAGGTTTGGGGTTTCTTGTGGCTTTTGGTTTTGCTTTTGTTCGGTTTTAAATAAAACAAAGTTGCTCAAGGAG
GAAACCTTTCGGATTTTTTATTTATTTTCTACACTATTTAATTTATATATATGTGTGTGTCTTTTTCTTTTCTAGAAACAAACATT
TTGTCGTTTGAAACAAATGTTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888005 hypothetical protein ARALYDRAFT_475074 [Arabidopsis lyrata subsp. lyrata] | 528 | 1e-051 |
| NP_849837 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana] | 513 | 5e-050 |
| NP_176467 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana] | 512 | 7e-050 |
| AAF19539 F23N19.16 [Arabidopsis thaliana] | 369 | 3e-033 |
| NP_177182 putative receptor serine/threonine kinase [Arabidopsis thaliana] | 340 | 6e-030 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3ECK0 Uncharacterized protein At1g62790.2 | 513 | 4e-050 |
| Q6NLF7 At1g62790 | 512 | 5e-050 |
| Q9SI70 F23N19.16 | 369 | 2e-033 |
| O04522 F20P5.4 protein | 313 | 6e-027 |
| B9RBQ4 Lipid binding protein, putative | 292 | 2e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G62790.2 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 514 | 2e-052 |
| AT1G62790.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 513 | 2e-052 |
| AT1G70250.1 receptor serine/threonine kinase, putative | 340 | 3e-032 |
| AT4G12360.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 203 | 2e-016 |
| AT1G73550.1 lipid binding | 179 | 1e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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