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Information for unigene UN17094
| FASTA Sequence |
| Unigene ID: UN17094 | Length: 1176 |
SSR | SNP | GCCACCACCTCCACAAAGTAATGATGCTGTAGAAGAACAAAATGAAGAAGATCAAGAAGAAGAAGAAGAGGATGAAAACAATGAAG
AAAATGAAAATGAGCAGCAACAGGATCAAATACCTGAGGAGTTTATATTTGACGCTGAGGGCGGTCTGGTGGATGAGAAGCTCCTC
TTCTTTGCTCAACAAGCTCAGAGACGTAAGGGTAAAGCTGGAAGAGCGAAGAATGTCATATTCTCGGAAGATAGAGGACGCTATAT
AAAGCCAATGCTTCCAAAGGGTCCAGTAAAAAGATTAGCAGTGGATGCAACACTTAGAGCAGCTGCGCCTTACCAGAAATTGCGCA
GAGAGAAAGATATATCAGGAACTAGGAAAGTCTTTGTCGAGAAAACAGATATGAGGGCCAAAAGAATGGCAAGGAAAGCTGGAGCC
CTGGTTATATTCGTGGTTGACGCAAGTGGCAGCATGGCGTTGAATCGTATGCAAAACGCCAAAGGTGCTGCACTCAAACTGCTTGC
AGAGAGCTATACAAGCAGGGATCAGGTAGCGATTATTCCATTCAGAGGAGATGCTGCGGAAGTGCTATTGCCCCCATCTAGATCAA
TTGCAATGGCAAGAAATCGTCTTGAGAGACTTCCTTGTGGTGGTGGTTCTCCTCTTGCCCATGGTCTAACAACGGCGGTAAGAGTG
GGACTTAACGCAGAGAAGAGTGGTGATGTGGGGCGTATAATGATTGTTGCAATAACCGATGGTCGAGCCAACATTACGCTGAAAAG
ATCAACTGATCCAGAGGGTATTGCCCCCGATGCTCCTAGACCCTCCTCACAAGAATTGAAGGATGAGATTCTGGAAGTTGCAGGGA
AGATATACAAGGCTGGGATGTCTCTACTAGTGATAGATACAGAGAACAAGTTTGTCTCAACTGGTTTTGCCAAGGAGATTGCAAGA
GTTGCTCAAGGAAAATATTATTACTTGCCAAATGCTTCAGATGCAGTCATCTCGGCTACCACTAAAGATGCTTTATCAGCTCTGAA
GAACTCTTAGACCTTCACTTTGTCTGCAATACTTGGTTTATGATTCCGGTTTACATTTTGTACATTCTAATTTCCTTTTTTGACCC
AACTAAACCAACATTTCATTCATCAAATATGGAAACGATATAGAGTGAAATGAAATGT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_563821 magnesium-chelatase subunit chlD [Arabidopsis thaliana] | 1664 | 3e-183 |
| AAL24388 similar to magnesium-chelatase subunit ChlD precursor [Arabidopsis thaliana] | 1664 | 3e-183 |
| AAD52031 magnesium-chelatase subunit CHLD precursor [Arabidopsis thaliana] | 1644 | 7e-181 |
| O24133 RecName: Full=Magnesium-chelatase subunit chlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin IX chelatase; Flags: Precursor | 1580 | 2e-173 |
| XP_002889699 T27G7.20 [Arabidopsis lyrata subsp. lyrata] | 1561 | 3e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SJE1 Magnesium-chelatase subunit chlD, chloroplastic | 1664 | 2e-184 |
| O24133 Magnesium-chelatase subunit chlD, chloroplastic | 1580 | 8e-175 |
| O22437 Magnesium-chelatase subunit chlD, chloroplastic | 1538 | 6e-170 |
| O07345 Magnesium-chelatase subunit chlD | 1012 | 6e-109 |
| P72772 Magnesium-chelatase subunit chlD | 994 | 7e-107 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93YN7 Similar to magnesium-chelatase subunit ChlD | 1664 | 2e-183 |
| B9RIG5 Magnesium-chelatase subunit chlD, chloroplast, putative | 1542 | 3e-169 |
| C5WW04 Putative uncharacterized protein Sb01g003860 | 1507 | 4e-165 |
| B9HP09 Predicted protein | 1493 | 2e-163 |
| B8AMB8 Putative uncharacterized protein | 1487 | 8e-163 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08520.1 CHLD; ATP binding / magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding | 1665 | 1e-185 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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