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Information for unigene UN17106
| FASTA Sequence |
| Unigene ID: UN17106 | Length: 1119 |
| SNP | GGACATAGGATTTTGGTTTCAGCTTTCTTCTCCTAAAAACCTCACACACCAACAACAACAAACGTGGGATGGGATCTCTTGTTCGT
GAATGGGTTGGGTTTCAGCAGTTTCCAGCGGCAACCCAAGAAAAGTTAATTGAATTCTTCTCCAAATTGAAGCAAAAGGACATGAA
CTCTCTGACAGTTGTTGTAATGGGTAAAGGCGGTGTCGGAAAATCGTCCACTGTCAACTCTTTAATCGGCGAACAAGTCGTCCGTG
TCAGTCCTTTCCAGGCGGAAGGTTTGAGGCCAGTGATGGTTTCAAGAACAATGGGAGGGTTCACTATTAACATCATTGACACCCCT
GGCCTTGTGGAAGCTGGTTACGTCAATCACCAAGCCCTCGAGTTAATCAAAGGGTTTCTTGTGAACAGAACCATAGATGTGTTGCT
GTATGTTGATCGTTTGGATGTGTATAGAGTGGATGAGCTAGATAAGCAAGTTGTTCAAGCTATCACCCAAACCTTTGGCAAAGAGA
TTTGGTGCAAAACCTTGCTTGTTTTGACTCATGCTCAGTTCTCCCCACCCGATGATCTTTCCTACGAAACATTCTCTTCCAAGAGA
TCAGATTCTCTCCTCAAAACTATCCGCGCTGGTTCTAAGATGCGTAAACAACAGTTTGAGGATTCTGCAATTGAGGTTGTATATGC
AGAGAACAGTGGGAGATGCAGCAAGAATGACAAGGACGAAAAGGCATTACCAAATGGTGAGGCGTGGATCCCGAACTTGGTTAAGG
CCATAACCGATGTTGCTACAAATCAGAAGAAAGCGATTCATGTTGACAAGAAGATGGTAGATGGATCTTACTCTGATGACAAAGGA
AAGAAACTCATCCCTCTTATCATTGCCGCTCAGTGGTTCGTCGTTAAGATGATCCAAGGAGCCATCAGAAATGACATCAAGATAAG
TGGTAAGCCACTCTAAGAGCTCTGAAGACATGAATAAGGTTTTGTTGTGATCCAACTTGAAGGAGATGAGTTTTTTCTTTTAATCG
ATTTTAGTTGCAGTATTTTCATGTTTTCCTGTTTTATCTTGTCTGTAATTTTTGGATATTTGTTGGAATAATAAAATTGTTTTGAA
A
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAQ17548 TOC33 [Brassica napus] | 1473 | 5e-161 |
| AAQ87027 TOC33 [Brassica napus] | 1473 | 5e-161 |
| AAQ73425 TOC33 [Brassica napus] | 1466 | 3e-160 |
| AAP87277 TOC33 [Brassica napus] | 1458 | 3e-159 |
| AAQ73426 TOC33-like protein [Brassica napus] | 1453 | 1e-158 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23680 Translocase of chloroplast 33, chloroplastic | 1445 | 3e-159 |
| Q38906 Translocase of chloroplast 34, chloroplastic | 962 | 4e-103 |
| Q41009 Translocase of chloroplast 34 | 919 | 3e-098 |
| Q9LUS2 Translocase of chloroplast 120, chloroplastic | 302 | 1e-026 |
| O81283 Translocase of chloroplast 159, chloroplastic | 294 | 1e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G02280.1 TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33); GTP binding / GTPase/ protein binding | 1446 | 2e-160 |
| AT1G02280.2 TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33); GTP binding / GTPase/ protein binding | 1446 | 2e-160 |
| AT5G05000.2 TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding | 962 | 3e-104 |
| AT5G05000.3 TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding | 962 | 3e-104 |
| AT5G05000.1 TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34); GTP binding | 962 | 3e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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