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Information for unigene UN17107

FASTA Sequence
Unigene ID: UN17107Length: 1106  SNP
GGATAACCTGTCGGAGGAGAGGAGAAGAGAAGAGGAGAGAGAACGTCCGGCGAAAATGGGAAATTCGAATTCGTCTACCGTAAATC
ACCGATTCACTTCGGCTTGCAGAGCTTTTACACAGAAGAAGCTCGAAGATCTCAAAACACTCTTCACCTCCCTCGCTTCTCAATCT
CAAAGCAATGACGACTCATACGTCTCCTACTCTGTTTTCCAGACCTACTTTGGTCTGAGTGGTGCGTTAGGAGAGAGGATGTTTGA
TATGGTCACTCAACACAGGAAAGATGGTAAATTGACTTATGAAGATCTCGTTATCGCCAAGGCAACCTACGAGAAAGGAACTGATG
ATGAGATTGCTGAGTTTATTTACCAGACTTTAGATGTCAATGGCAATGGCGTCTTGACTAGGTCAGATTTGGAGTTGGTCCTTGTG
GTGGTCTTCAAGAGTGTCTTCTCCACTAGCTCTGATGCGGAATACAAGGAGATGGTGGATGCGCTTCTCAACGCTGCTTCTTTCTC
TAAATCCACTGGTGGTGGTGATGATAAAGGAATGTCTTTTGAAGATTTCAGAAGCTGGTGCTCACACGTTCCTACTGTCAGAAAGT
TTCTCGGAAGCTTGCTTACACCGCCCAGTCCAGCGAGACCTGGATATCAAGTCCCGCATCTGCTTTACGACGAGGATACTGTGGAT
TCAAATATACTTCTGTTGAAGAAGGAATACGCTTGGCATATCGGAGGCGCTCTTCCTCACCACGAGCTTCAAGAGTGGAAACTCCT
CTATCACAGTTCTTTACACGGTCAAAGCTTCAACACATTCCTCGGTCACACTTCAAACACTGGTATGTCTGCATCCGTGTTGATCA
TCAAAGACAGAGAAGGCTGTGTGTATGGAGGATACGCCTCTCAGCCTTGGGAGAGGCACAGCGATCTCTACGGAGACATGAAGTCT
TTTCTTTTCCAGCTTTACCCTAATGCCTCCATCTTCCGCCAATTGGAGCCACACAACATCCAATGGTGTGCTACGAACTCACATCA
GAGACATCCCAACGGCATAGATCGAGGAAGATCACCACTTTGGTCTGTTTTATCTCGAGCTCGACAAGCAGACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873245 hypothetical protein ARALYDRAFT_487434 [Arabidopsis lyrata subsp. lyrata]13623e-148
NP_196244 TLD-domain containing nucleolar protein [Arabidopsis thaliana]13562e-147
BAH19572 AT4G34070 [Arabidopsis thaliana]10659e-114
NP_195133 Calcium-binding EF-hand family protein [Arabidopsis thaliana]10659e-114
XP_002308447 predicted protein [Populus trichocarpa]10561e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q8K0P3 TLD domain-containing protein KIAA16091944e-014

TrEMBL top hits (Blast detail)Scoree value
Q9FNI2 Putative uncharacterized protein At5g0626013561e-147
B9DFQ5 AT4G34070 protein (Fragment)10656e-114
B9HBR8 Predicted protein10567e-113
B9SVZ9 Putative uncharacterized protein10371e-110
A5B934 Putative uncharacterized protein9771e-103

Arabidopsis top hits (Blast detail)Scoree value
AT5G06260.1 nucleolar protein-related13566e-150
AT4G34070.1 calcium ion binding10654e-116
AT2G45380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: calcium ion binding (TAIR:AT4G34070.1); Has 72 Blast hits to 71 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).3817e-037
AT2G44850.1 unknown protein2213e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  43%
 
102  29%
 
121  14%
 
111  14%

Unigene MembersMember information