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Information for unigene UN17109

FASTA Sequence
Unigene ID: UN17109Length: 991  SNP
AATAACCTGGAATCTATAACTTGTGAGTAGTCGTAAGTCACCTAACAAAAAAACAAACAATAAACTGCGAGGTCCCTGGCCACGAA
TAGGGCCACAAAAAACCTAACTATGTTGATTTTTTTTTGTCATCAAACTATGTTGATTTTGATTTCCAATATCCATATTTCCAAAG
GAAGATCTGGTCTGAAATATATGTAACGAGGTTTTTTCTAATACATAGAAACACTCAAGTTTACAAAATGTGGGCAAGAGAGTATA
AGTAAGTCCAAACTGGCTGTGGTATATGTAAATTTGTAAGAAAAATCACGTCTTGCACGCCTTACTGTCACCACATGTCTCTACCT
TATTTTTCTTTCTCGCTTCCAAAATAGCTTCTATAGGTGGCCGCCCTGTGACCTGAAGTCGATACTTAGCCCAGAAATCATACACT
GCATCAGCTACCTTCCCTATTGGTTCAAATTTAGTGATAGTGTAAACCCACCCAAGCCCAACCTCCTCATATAGTTTCCTAAATGC
CTCCACACCCGTTACCACATTTCCATCGGACTGAATCGCGTGGATTTGCCCCATAACTGTTTTGTAATCAAGCCCTTGATTCTCTT
GCGGGGAATAATCATTGGAACTGATGTCAACGAACTTTATCGTTCCATTTTCCTCATTCCTTTCCTTAAGCATATTAACCTCACGC
ATACAGAGAGGGCAATCCCCATCGTAAAGCATTTTGATTTTCCAATTCTCAGGTTTTGGCTCGTCGTTGTTCTTTAATTGTGTAAC
GGGATCAACACTTGCTCCTTGTATCGCCCTAATTTGATATCTAAACCCTTTTGGGATGATTTGAGGTTTGAAAACGGGATAGAAAT
GGTGTGATGATAGAGATCGAAGAGAAGGGTTGCTTCGGTGCTTCCATATTACGAACGCAGCAGCAGCTCCTCGCGTTGCCATTTTT
GTATTCTCTTCCAATTTTTTTCTCAGATGCAAAATGTGCTTCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864035 hypothetical protein ARALYDRAFT_495066 [Arabidopsis lyrata subsp. lyrata]9322e-098
NP_568719 putative thiol-disulfide oxidoreductase DCC [Arabidopsis thaliana]9223e-097
XP_002283569 PREDICTED: hypothetical protein [Vitis vinifera]6992e-071
XP_002322151 predicted protein [Populus trichocarpa]6642e-067
XP_002534285 conserved hypothetical protein [Ricinus communis]6553e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q8W485 Uncharacterized protein At5g50100, mitochondrial9221e-098

TrEMBL top hits (Blast detail)Scoree value
B9IEM6 Predicted protein (Fragment)6642e-067
B9T7R6 Putative uncharacterized protein6552e-066
C6TMF4 Putative uncharacterized protein6391e-064
Q8W437 PBng1436264e-063
C6TDB1 Putative uncharacterized protein6094e-061

Arabidopsis top hits (Blast detail)Scoree value
AT5G50100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 598 Blast hits to 598 proteins in 152 species: Archae - 0; Bacteria - 266; Metazoa - 3; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink).9221e-099

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
117  54%
 
102  15%
 
72  15%
 
122  15%

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