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Information for unigene UN17113
| FASTA Sequence |
| Unigene ID: UN17113 | Length: 1066 |
| SNP | GTACAAGATGCATTCTTCAAATCTAACATGTACGAAAATTTCGGGGATATTGGAATGAACATCAAGCGAATGGTAGATGACTTTCA
GCAGGTGGCTAAGAGTAACCAAAATATCCAGACAGTAGAGGACATGGCCAGATTTGTTGACAACTACCCTGAGTACAAAAAGATGC
AGGGCAACGTCTCAAAGCATGTGACCCTGGTTACTGAAATGAGCAAGCTAGTTGAAGCAAGGAAACTGATGCTGGTTTCACAGACA
GAGCAGGACTTAGCTTGCAATGGTGGCCAAGGAGCTGCATATGAGGCAGTTACGGATCTCTTAAACAATGAAAGTGTGTCTGACAT
CGACCGGCTACGTTTGGTGATGCTGTATGCTCTGCGCTATGAGAAAGAGAATCCCGTTCAGTTGATGCAACTGTTCAACAAATTGG
CTTCACGGTCTCCCAAGTACAAACAAGGGCTTGTTCAATTTCTCTTGAAACAAGCCGGAGTAGAGAAGCGAACTGGTGATCTGTTT
GGGAATAGAGATCTTCTGAATATAGCACGCAACATGGCTCGTGGACTTAAGGGGGTTGAGAATGTGTACACTCAACATCAGCCACT
TCTGTTTCAAACAATGGAGAGCATAACCAGAGGGAGATTACGAGATGTGGATTACCCTTTTGTTGGAGATCACTTTCAACAGGGAC
GGCCACAAGAGGTGGTGATATTCATGGTCGGTGGAACAACGTACGAGGAATCACGCTGCGTTGCTCTACAAAACTCGACCAACTCC
GGGATTCGGTTTATTCTCGGCGGCACCGCAGTGCTTAACTCCAAGAGGTTTCTCATGGACTTGGAAGAAGCACAAAGGATATCAAG
ATCAGGTAGCCATATGGTGTGAAGAGAGGGATATAACAAACGAGATTGTGCATTAGTAGTCTATATATATAAGATTCTTCCTTATG
ATAAATATTTTGAGTACAGAAGAACTAAACATGATTGTGTGACCATTTTTGGAGAGACAGTTAAGAAGAAGATTGTGGTTAGGTTC
TTCGAATCATTCCTACATATGACGAGATTACACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887671 hypothetical protein ARALYDRAFT_476877 [Arabidopsis lyrata subsp. lyrata] | 1460 | 1e-159 |
| NP_565150 vacuolar protein sorting-associated protein 45-like protein [Arabidopsis thaliana] | 1454 | 7e-159 |
| AAC39472 vacuolar protein sorting homolog [Arabidopsis thaliana] | 1448 | 3e-158 |
| XP_002526156 vacuolar protein sorting-associated, putative [Ricinus communis] | 1320 | 2e-143 |
| XP_002263592 PREDICTED: hypothetical protein [Vitis vinifera] | 1318 | 4e-143 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49048 Vacuolar protein sorting-associated protein 45 homolog | 1454 | 3e-160 |
| Q54GE3 Vacuolar protein sorting-associated protein 45 | 643 | 3e-066 |
| P97390 Vacuolar protein sorting-associated protein 45 | 638 | 1e-065 |
| Q9NRW7 Vacuolar protein sorting-associated protein 45 | 637 | 2e-065 |
| O08700 Vacuolar protein sorting-associated protein 45 | 635 | 3e-065 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SJI7 Vacuolar protein sorting-associated, putative | 1320 | 2e-143 |
| A9PFJ4 Putative uncharacterized protein | 1307 | 5e-142 |
| B9H7N8 Predicted protein | 1302 | 2e-141 |
| B9GTM3 Predicted protein | 1290 | 5e-140 |
| B8AH63 Putative uncharacterized protein | 1196 | 4e-129 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G77140.1 VPS45 (VACUOLAR PROTEIN SORTING 45); protein transporter | 1455 | 2e-161 |
| AT1G02010.1 SEC1A (SIMILAR TO ELECTRON CAREER 1A); protein transporter | 121 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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