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Information for unigene UN17118

FASTA Sequence
Unigene ID: UN17118Length: 370  SNP
GGAAAAACCCTAGTCTAACAAAAAGCTGTCGTCACACATTTGCCGGAGGTAGCGCCGATTCAGTCGTCAGAACTACTATGGGTAAG
GTTCACGGTTCATTGGCTCGTGCCGGTAAGGTGAGAGGACAGACGCCTAAAGTGGCTAAGCAGGACAAGAAGAAGAAGCCACGTGG
CCGTGCCCACAAACGTCTTCAACATAACCGCCGTTTCGTCACCGCCGTTGTTGGATTTGGCAAGAAGAGAGGACCCAACTCATCTG
AGAAATAGATGATGAACGCTTTGGATTTGAAGTTTTGCGGATTTTGTTTTAACATCTTTCTTGTTTAATGTGTAAGACTCTGCTAT
TTTCTCAATAAAATTGACTTTTTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194668 40S ribosomal protein S30 [Arabidopsis thaliana]3222e-028
CBI35991 unnamed protein product [Vitis vinifera]3151e-027
NP_001056941 Os06g0172600 [Oryza sativa Japonica Group]3141e-027
NP_001173188 Os02g0804150 [Oryza sativa Japonica Group]3113e-027
BAK07914 predicted protein [Hordeum vulgare subsp. vulgare]3104e-027

Swiss-Prot top hits (Blast detail)Scoree value
P49689 40S ribosomal protein S303226e-030
P62866 40S ribosomal protein S302312e-019
P62860 40S ribosomal protein S302312e-019
P62861 40S ribosomal protein S302312e-019
P62862 40S ribosomal protein S302312e-019

TrEMBL top hits (Blast detail)Scoree value
Q0WWR7 Ribosomal protein S30 homolog3221e-028
A9P9H8 Predicted protein3141e-027
B6SLI1 40S ribosomal protein S303141e-027
B9RKD3 40S ribosomal protein S30, putative3141e-027
C5XV41 Putative uncharacterized protein Sb04g0363603141e-027

Arabidopsis top hits (Blast detail)Scoree value
AT2G19750.1 40S ribosomal protein S30 (RPS30A)3234e-031
AT4G29390.1 40S ribosomal protein S30 (RPS30B)3234e-031
AT5G56670.1 40S ribosomal protein S30 (RPS30C)3234e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  10%
 
66  60%
 
73  30%

Unigene MembersMember information