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Information for unigene UN17122

FASTA Sequence
Unigene ID: UN17122Length: 821  SNP
GGATACTTGTCCACAACGAAAAACTAGAAGCTTCGTCGTCGCCGAAGATTACAACCAGGTCTCGTCGATGGCCGCTAGGTTTCTTA
GTCTGAGACGCGCCTTATCTCTCTACCTCACTAACCAACCACCTCGGCTTCCTCTGTTCAAAGCAGGTAAGCTTTCACAATCAAAG
TCACTATTGAGCAGAGATCATGCGTATTTGGGATTACTTCATAGGCAGTTCTGTGGATCCCGTGAGGCTAGTGAAGCTGCTGCAGT
AACCAAGTCTTCAAACTCCGTTGCTGAACTCTCCAAAGCTCCTTCCACTCCCCCTGCAACGGCCTCCGAGGAACTGATTGTGAAAT
ACAAGTCCCAGTTGAAAATAAACCCGAGGCATGACTTCATGATGGTGTTCACCTGCAAGGTATGCGAGACGAGGTCCATGAAGATG
GCGAGCCGAGAATCATACGAGAAGGGCGTTGTGGTGGTGCGATGCGAGGGGTGTGATAATCTGCATCTGATTGCAGACCGTCTTGG
CTGGTTTGGAGAACCGGGGAGCGTGGAGGAGCTTCTAGCTGCTCGTGGGGATGAATTCAAGAAAGGATCCATGGATTCTCTTAGTC
TTACGGTTGATGATTTGGCTGGGAAAAAGATGTCCGATGAATAGAGCAAGAAGCTCTTCGTTGCTCTACTACTAGGACTTGAACCC
TGCGGAAAACATAAAATATTTTCTGTCTTTTAATATTAATTTTCGTAACAATATTTGGTATTATAGGTGTAATGTGAATCCACTAA
GCTTTGATCTTTTAAGCGGATTGTAAAATGAGCACAAGAGATAACAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974434 Zim17-type zinc finger protein [Arabidopsis thaliana]6401e-064
BAE99394 hypothetical protein [Arabidopsis thaliana]6401e-064
AAO64784 At3g54830 [Arabidopsis thaliana]6363e-064
ACN37055 unknown [Zea mays]4213e-039
NP_001150499 LOC100284130 [Zea mays]4151e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q0IH40 DNL-type zinc finger protein2095e-016
Q9D113 DNL-type zinc finger protein1997e-015
A1L1P7 DNL-type zinc finger protein1933e-014
Q5SXM8 DNL-type zinc finger protein1933e-014
B3LPE4 Mitochondrial protein import protein ZIM171432e-008

TrEMBL top hits (Blast detail)Scoree value
Q0WU04 Putative uncharacterized protein (Fragment)6407e-065
Q84TF2 At3g548306362e-064
C0PPD9 Putative uncharacterized protein4212e-039
B6TQA5 DNL zinc finger family protein4159e-039
C5XVZ0 Putative uncharacterized protein Sb04g0374754051e-037

Arabidopsis top hits (Blast detail)Scoree value
AT3G54826.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, Zim17-type (InterPro:IPR007853); Has 284 Blast hits to 284 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 79; Plants - 58; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).6413e-067
AT1G68730.1 zinc finger (DNL type) family protein1225e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  32%
 
94  21%
 
73  16%
 
114  21%
 
62  11%

Unigene MembersMember information