RadishBase

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Information for unigene UN17124

FASTA Sequence

Unigene ID:UN17124

Length: 972

CTAGCACTTAATTTGAATGATTAGATTAGCCACTGACTAAATCAGTACTTATTTATGTACCATTGTACAATATCATAGTTTGTAAG
CTAAAGATTAGCACTTAATTTGAATGATTAGATTAGCCACTGACAAATTTGAATGGCCAAAAAAAAAAGATTAGCCACTGACTATA
TCAGTACTTATTTATGTATCAGTTTATTCTCTCACAAAATAAACATACTATATTCTCAGAAAGTAAAAATATACTTTTGAGATTAC
TGCCTCAAAGTTCTTTATATGTTTAGTGTCCTAAATATACAATATTCTATTCTTCGTTTTTTGGAGGAAATATAGCTTCTTTAGCC
TGTGCTGCTTTATCTCCAACGTACTTAGCGGTTTTCTTGCGCATGTCAGTCGCCGAATCTTTGGCTTCATCAGCTTTTTCAACAAT
GAAATCTTTAGCTTTTTCAGTCATTAAAACAGTTTCTTCCTTGGTCTCTTTGCCTTTATCCGTCACAAACTCCGAAGCTTTCTTAG
CAGTTTCAGCCACCGTGTCCATCGCTTCACCAGCTTTCTCAACAATATAGTTTCTTGCGCTCTCCATATGATCTTTAACTTCTTGT
CCTTTCTGAGCAGTCACGTGCCCCACTTCGCTCCCCATGTCCTTCACGAACTCGCCAGCTTTCTGTGAGGCATCATCTAGCCATTT
GGGGTCGTTCTTTGACTTTCCATCACCTTTCACGGCGGCTAGGACCCATGACTTCTTGCGCTGAGGTGTAATGGTCGCATACTTCC
GGCCAACACTCATTGATCCACCGCTTACGCCGTCGCTTTTCTTGCTTCCGTTGATCAATAACGAAGAGCCAACCCCACTAAGCATG
GCTCCAGAAATAGACATCGACATGAGGATCTCTTACCTTTGTTCTCTTAAGAGGTGGAAATTGTGTGTTTTGAGAGTAGAAGAATC
TAAAGTGAGTGAGGAGTTAAATTCCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
XP_002876894 late embryogenesis abundant domain-containing protein [Arabidopsis lyrata subsp. lyrata]	660	7e-067
NP_178469 late embryogenesis abundant domain-containing protein [Arabidopsis thaliana]	658	1e-066
ABK28482 unknown [Arabidopsis thaliana]	658	1e-066
XP_002875233 hypothetical protein ARALYDRAFT_484297 [Arabidopsis lyrata subsp. lyrata]	624	1e-062
NP_565306 late embryogenesis abundant domain-containing protein [Arabidopsis thaliana]	608	7e-061

Swiss-Prot top hits (Blast detail)	Score	E value
P20075 Embryonic protein DC-8	167	4e-011

TrEMBL top hits (Blast detail)	Score	E value
A0MEI5 Putative uncharacterized protein (Fragment)	658	8e-067
Q9ZPQ7 At2g03740	658	8e-067
Q9SI55 At2g03850	608	5e-061
Q9SKP0 Late embryogenesis abundant protein (AtECP63)	186	4e-012
C0Z2N1 AT3G53040 protein	183	1e-011

Arabidopsis top hits (Blast detail)	Score	E value
AT2G03740.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein	658	5e-069
AT2G03850.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein	608	3e-063
AT2G36640.1 ATECP63 (EMBRYONIC CELL PROTEIN 63)	186	3e-014
AT2G42530.1 COR15B (COLD REGULATED 15B)	185	3e-014
AT3G53040.1 late embryogenesis abundant protein, putative / LEA protein, putative	183	6e-014

EST library breakdown for ESTs in the assembly


10	10			18%


11	4			7%


12	11			20%


7	3			5%


6	9			16%


9	11			20%


8	8			14%

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