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Information for unigene UN17128
| FASTA Sequence |
| Unigene ID: UN17128 | Length: 1390 |
| SNP | AGACCAATTTCGACTTTCTCCATGTGTGTATATTGTACACGGAAATAACTTTTAGACAAGGCAGACACGACCACATGTCCAGACCA
CACGGATATGAGTTTACCGTTCAAGTCTTATCTTCTTAGATCAATTATATTTTTCTAAAATAAACAACGGAGCCAAGAAATGAACA
TTAATGACGTTAAGGGATCTCATGCATCCACATTAATTTCTCACGTCTCTTATTCAATCTCCTATATCATAGATAGAAACCAATTC
ACTGAAGATCACTTATACGACAATTTTATTGTTTATCTTAAACTTAGAGAGGCTTCTGGCAAGTGATGATGCCAAACTTAATGACA
CCTTTCTTGTACCCTTCGATCATCAATGGCATTGTCAATGCTCCTTTTATACTCTTCATACCACTACGAAGCAGAAACACAAGGCC
CTTCCATGTTAATGCGGTTCGTATAACCGCCGGCCAGAAAGGAGCTACATTCTCTGACCAATCTGCACACTTAATATCCTGGAGCG
AGAGGGATTGAAGCAAATCGACATAATCAGAGGTGGAGCACCAGGCCGGGAGATAAAATGTTTTGCAGATTCTGTCCAAGAGGTTC
TGTTCCCATGGCTGCAAAGCTTCTTCCCCTGGGGATAGATTTCTGTGGCACCATGTCACTATTATTATCCTTCCTCCTGGAGCCGC
CACACGTACCAATTCCTTCACGAACTTGGCCTTGTCAGGCATATGCTCACCGCTTTCCATTGACCACACAAGATCGAACATACCAT
CTTCAAATGGTTGCTCCAGTGCATCTGCAACCTGGAAGGAAACCTTATGAGAGAGTGATTGAGCGGCGGCGAGATCATTGGCTCTC
TTGGCTTGAACAGGACTGAGTGTGATGCCAACGCATTCGGCACCAAATTTAGAGGCAATATATCTTGAGCTTCCTCCGATCCCACA
ACCAACATCCACTACTCTCTTTATCTTTTTCTCCTCTTCAGTAACGCCAGCGAAACGTAGAGACTCTTCAATCATCCGGATCTGAG
CTTCCCGGTGACCGGAATCTGAAAGTTGAACAGAGGAATCAGGATCGTAGAAGCCGTGATGCATATGATCTCCCCAAATCTCCTCC
CATAATCCCGACGTCTCGTTGTAGAATTCAGCTATTCCTTCTCGCAGCGCCTCGACGGAGGAGGTGGCAGCAGCCGTCACAGCCAC
GCTTCCACGTGATGCCGTCTTCATCGTCGTCATTAAGGCTGAGGATGGCCGTTGGGACTGAATGAGAAGCGACGGTGAACGGAGAG
AAGAAACTTTGTGCCTGGGGAGGCTGATGAGAGAGGAGGGTGCGAGAGTCGCTTTCATTTATAATGAGAGGTTGGCGAAACAGGAA
ATGTGGCTGTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACD03285 gamma-tocopherol methyltransferase [Brassica napus] | 1753 | 2e-193 |
| ACD03286 gamma-tocopherol methyltransferase [Brassica napus] | 1739 | 9e-192 |
| ACD03288 gamma-tocopherol methyltransferase [Brassica napus] | 1720 | 1e-189 |
| AAO13806 gamma-tocopherol methyltransferase [Brassica oleracea] | 1712 | 1e-188 |
| ABF56215 gamma-tocopherol methyltransferase [Brassica napus] | 1697 | 7e-187 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZSK1 Tocopherol O-methyltransferase, chloroplastic | 1542 | 3e-170 |
| O82427 24-methylenesterol C-methyltransferase 2 | 211 | 6e-016 |
| O14321 Sterol 24-C-methyltransferase | 189 | 2e-013 |
| Q9FR44 Phosphoethanolamine N-methyltransferase 1 | 189 | 2e-013 |
| Q9C6B9 Putative phosphoethanolamine N-methyltransferase 3 | 184 | 8e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B2ZC77 Gamma-tocopherol methyltransferase | 1753 | 1e-193 |
| B2ZC78 Gamma-tocopherol methyltransferase | 1739 | 6e-192 |
| B2ZC80 Gamma-tocopherol methyltransferase | 1720 | 1e-189 |
| Q8GZS9 Gamma-tocopherol methyltransferase | 1712 | 8e-189 |
| Q1HBJ5 Gamma-tocopherol methyltransferase | 1697 | 5e-187 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64970.1 G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE); tocopherol O-methyltransferase | 1543 | 2e-171 |
| AT3G18000.1 XPL1 (XIPOTL 1); methyltransferase/ phosphoethanolamine N-methyltransferase | 189 | 2e-014 |
| AT1G73600.2 methyltransferase/ phosphoethanolamine N-methyltransferase | 184 | 7e-014 |
| AT1G73600.1 methyltransferase/ phosphoethanolamine N-methyltransferase | 184 | 7e-014 |
| AT1G48600.2 phosphoethanolamine N-methyltransferase 2, putative (NMT2) | 182 | 1e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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