Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17135

FASTA Sequence
Unigene ID: UN17135Length: 1204  SNP
GGACTATTAGTTTCTCCTTCCATCGACGATTTCTTCATAAATACTTAAAAACCTGTTTCGATTCTGAAAATTCATTTTGCCGATTA
CTTCCTCAGGGATGCTGTTGAGTAGGGTTTTATCGAGAGTTTCTCGCACCTCGAGCTTACGCTCGTCTCTCTCCTCCTTGGCTTCT
TCTCCTCAGAGGAATCAGATTGTTCCCATTCTTTCCAGCCAATTTCACTCCCTCGTACGCGGAACTCCCAATCAGCTTGTTGCAGC
TCCAGTGTCGCTTCTAAACCATTCATCTCAAGATCTCAATGTCTTTCAAAGGTTTGGCTTTTTCTCCTCTTCCTCTGCTGAATCCA
AGGAAAATGAGGCCACTCAAGCTTCTGAGGACGATGTGGAGGCTATGAAACCTACAACAGATGATTTTGAGGGTTTGTCAAGGGAC
GATTTGGTGAAGCTTGTGGTTGAGAAGGAAGATCTTGTCAATGTTCAGAAGGAAGAGGTGAAGGAAATGCAAGATAAAGTTCTTCG
AACTTATGCTGAGATGGAGAATCTAATGGCCAGGACTAAACGTAATGCTGAGAACGACAAAAAGTTCGCCATACAGAAATTTGCAA
CCAGCCTTCTGGATGTGGCGGATAATCTTGGGAGAGCTTCTTCTGTTGTCAAGGAGAGTTTTTCCAAGATTGACACTTCAAAAGAT
TTGGCTGGTGCTACTCCGCTGTTGAAAACCCTTTTAGAAGGAGTGGAGATGACTGAGAAACAGTTAGCTGAGGTATTTAAGAAATC
TGGTTTGGTGAAAGAAGATCCTGTAAATGAACTGTTTGATCCAAACCGACATAACGCAGTGTTCCAAGTCCCAGATGCTTCCAAGC
CAGCAGGCACAATCGCTCATGTCCTTAAGTCTGGATACTCGTTGTTTGATCGAGTTATAAGACCAGCTGAGGTTGGTGTTACTTGC
GCTGTGGTGAACCAAGAGAAAGAGTCTGAAGCTTGAAAAAACTCAAAAACAACAAAGAGTTGAGCTTTGTTTGAACTTTTACACCT
TCATGTTGTTGTTTTCTTTTATACTTGTTAGCTCTCTCACACATACTCACATATTCATTGGATGAACAAGATCTCATAAAAGTAGC
TTAACGTTGCTGCACTTCCAGGGAAGCCCCTGGTTCTGTAACTTTATTTCACAAAATTTTCATGAAATTAAAAAAATGGAACATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864383 hypothetical protein ARALYDRAFT_495605 [Arabidopsis lyrata subsp. lyrata]10847e-116
AAM63252 chaperone GrpE-like protein [Arabidopsis thaliana]10731e-114
NP_200331 co-chaperone GrpE family protein [Arabidopsis thaliana]10632e-113
NP_567757 molecular chaperone GrpE [Arabidopsis thaliana]7503e-077
CAB36524 grpE like protein [Arabidopsis thaliana]7503e-077

Swiss-Prot top hits (Blast detail)Scoree value
Q79V15 Protein grpE2341e-018
Q07US4 Protein grpE2294e-018
B3Q970 Protein grpE2294e-018
B6JCI1 Protein grpE2285e-018
Q6NCY6 Protein grpE2277e-018

TrEMBL top hits (Blast detail)Scoree value
Q8LDE9 GrpE protein homolog10738e-115
Q9FLP3 GrpE protein homolog10631e-113
Q8LB47 GrpE protein homolog7502e-077
Q9SZ18 GrpE protein homolog7502e-077
Q9ZSP4 GrpE protein homolog7314e-075

Arabidopsis top hits (Blast detail)Scoree value
AT5G55200.1 co-chaperone grpE protein, putative10645e-116
AT4G26780.1 AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization7501e-079

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  27%
 
62  13%
 
83  20%
 
106  40%

Unigene MembersMember information