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Information for unigene UN17146

FASTA Sequence
Unigene ID: UN17146Length: 1351  SNP
CAAGCTCTTCTCTCTGCTAGACTAAAGACCCCTTTTCCTTCTTTCTCCGGCGATATTTTTCCCAATCGATCAGATGGCGAAGGATC
CAGTTCGCGTTCTCGTCACTGGAGCTGCAGGACAAATCGGATACGCTCTAGTACCTATGATCGCAAGAGGAATCATGCTGGGTGCA
GATCAGCCTGTGATCCTCCACATGCTTGATATCCCTCCTGCTGCTGAAGCTTTGAACGGTGTCAAAATGGAGTTGATCGATGCTGC
TTTCCCTCTTCTCAAAGGTGTGGTGGCTACCACTGACGCCGTGGAAGGGTGTACTGGTGTGAACGTTGCAGTTATGGTTGGTGGTT
TCCCGAGGAAAGAAGGAATGGAGAGGAAGGATGTCATGTTCAAGAACGTTTCCATTTACAAGTCCCAAGCTGCTGCTTTGGAGAAG
CACGCCGCACCTAACTGCAAGGTCTTGGTTGTTGCAAACCCTGCAAACACCAACGCGTTGATCCTTAAGGAATTCGCACCGTCCAT
CCCCGAGAAGAACATCACTTGCTTGACGAGGCTTGACCACAACAGGGCCTTGGGACAGGTCTCTGAGAGGTTAAACGTGCCAGTCT
CTGATGTCAAGAACGTGATTATTTGGGGAAACCACTCGTCGAGCCAGTACCCAGATGTCAACCACGCTAGCGTCAAGACTTCTTCT
GGGGAGAAGCCAGTGCGTGAGCTTGTCAAGGACGACGAGTGGTTGAATGGAGAGTTCATCACAACCGTTCAACAACGTGGAGCTGC
TATTATCAAGGCCAGGAAGCTGTCTAGTGCACTCTCTGCTGCTAGCTCAGCTTGTGACCATATCCGTGATTGGGTCCTTGGAACTC
CCGAGGGCACATTTGTTTCAATGGGTGTGTACTCAGACGGATCATACAACGTTCCATCTGGACTTATCTACTCTTTCCCTGTAACC
TGCCGTAACGGAGAGTGGTCTATTGTCCAAGGTTTACCGATCGATGAAGTGTCGAGGAAGAAGATGGATTTGACAGCAGAGGAGTT
GAAGGAAGAGAAGGACCTTGCTTACTCATGCCTCTCTTAGACCGGTTTTTATCCTTGAAAGATGATAACGGAGCTTTGTTTCGAAT
AAGGATGCTTTGTTTATTAAAAATAAATACTTTGAATAACCTCATGAGGTTAGGAGCTGTACTTGTGTTTTCCAGTATTTTGAATC
TTTGATCTCTTTCAGTCTGGGCTTTTGGCCGAAGTGTGCGGGTTTTATTTCGTTTTTTTTGGTCAAACTGTCCAAGATACAGTACA
TGGTTCATCCATGGATTTCATTGATAGGAAAATTCTCATGGACTATTTAATCAACTTCTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34213 unnamed protein product [Thellungiella halophila]16709e-184
XP_002865429 cytosolic malate dehydrogenase [Arabidopsis lyrata subsp. lyrata]16582e-182
XP_002892216 hypothetical protein ARALYDRAFT_470418 [Arabidopsis lyrata subsp. lyrata]16511e-181
NP_171936 malate dehydrogenase [Arabidopsis thaliana]16465e-181
AAM65532 cytosolic malate dehydrogenase [Arabidopsis thaliana]16278e-179

Swiss-Prot top hits (Blast detail)Scoree value
P93819 Malate dehydrogenase, cytoplasmic 116462e-182
P57106 Malate dehydrogenase, cytoplasmic 216248e-180
Q08062 Malate dehydrogenase, cytoplasmic15862e-175
O48905 Malate dehydrogenase, cytoplasmic15503e-171
Q7XDC8 Malate dehydrogenase, cytoplasmic15469e-171

TrEMBL top hits (Blast detail)Scoree value
Q8LA78 Malate dehydrogenase16276e-179
Q2PYY8 Malate dehydrogenase15935e-175
C4IZW9 Malate dehydrogenase15863e-174
Q9FSF0 Malate dehydrogenase15863e-174
C5WYF2 Malate dehydrogenase15802e-173

Arabidopsis top hits (Blast detail)Scoree value
AT1G04410.1 malate dehydrogenase, cytosolic, putative16471e-183
AT5G43330.1 malate dehydrogenase, cytosolic, putative16255e-181
AT5G56720.1 malate dehydrogenase, cytosolic, putative12932e-142
AT5G58330.2 malate dehydrogenase (NADP), chloroplast, putative5986e-062
AT5G58330.1 malate dehydrogenase (NADP), chloroplast, putative5986e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1114  70%
 
201  5%
 
103  15%
 
121  5%
 
81  5%

Unigene MembersMember information