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Information for unigene UN17153
| FASTA Sequence |
| Unigene ID: UN17153 | Length: 865 |
| SNP | GGGCTCCTTCTGATCTTTCTTCTCAGCTTCGATCTCCGAAACCGAAACAAACAATGCAGTTCTTCGGCGGATCCGAGATAAGCCCG
TCGCCTCCCGTCCCAACGGCGAGTGGGAACAACGCGCACATGATGTACGTGTTCAACCGCAACGGCGTGTGTCTCCTCTACAAGGA
ATGGAACCGGCCTCTCCACACGCTCAACCCTCAGCAAGATCACAAGCTCATGTTCGGTCTCCTCTTCTCCCTCAAATCCCTAACCG
CCAAAATGGACCCCACCAATGCGGATAAGGGGAACCTAGGGGTCCCACAGTTGCCGGGGCAAGGATGCTCTTTCCACAGTTTCAGA
ACCAACACTTACAAGCTTAGCTTCATGGAGACTCCCTCTGGTATTAAGATTATCTTAGTAACTCATCCAAAGACGGGAGATTTACG
CGAATCCCTCAAGTACATCTACGGTTTATACGTTGAGTATGTGGTAAAAAACCCTATCTACAGCCCAGGATCTCCAATCAAGTCAG
AGTTGTTCAACACTGCACTTGACCAATATGTGAGGAGCATCTCATAGTGTCTGCATTACAAGATTTGGCCATTGGAACTTCTGCTT
CACAAAACTTTCTTCTGAACAATCTCCTAGATAAGAGAGAATTGTGGTAGAAAGATCAATCTCGAATACACTGCTTTCCTCTGCAT
ATATATGTTTCGTTCTCTTTTTTAAAATCAATGTATTTGCTTGTTTTTTTCTTTGATAAGTTACTGTATTGGCTTGTTTTCAAAGA
TGTTTATGGTTAACGCATTTTTTTTTGGTTAACGCAAATCTTGAGATACCATTTGAGCAAGAAACCGTGATTTGGATATTTTATGT
AGCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175528 SNARE-like protein [Arabidopsis thaliana] | 891 | 9e-094 |
| XP_002327510 predicted protein [Populus trichocarpa] | 850 | 5e-089 |
| ACJ84157 unknown [Medicago truncatula] | 835 | 3e-087 |
| XP_002513631 protein with unknown function [Ricinus communis] | 813 | 1e-084 |
| XP_002276513 PREDICTED: hypothetical protein [Vitis vinifera] | 811 | 2e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5NCF2 Trafficking protein particle complex subunit 1 | 194 | 3e-014 |
| Q2KMM2 Trafficking protein particle complex subunit 1 | 194 | 3e-014 |
| Q17QI1 Trafficking protein particle complex subunit 1 | 187 | 2e-013 |
| Q9Y5R8 Trafficking protein particle complex subunit 1 | 187 | 2e-013 |
| Q557G3 Trafficking protein particle complex subunit 1 | 183 | 5e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SYB8 At1g51160 | 891 | 6e-094 |
| B9MX74 Predicted protein | 850 | 4e-089 |
| B7FHC8 Putative uncharacterized protein | 835 | 2e-087 |
| B9RIR2 Putative uncharacterized protein | 813 | 7e-085 |
| A5C4U4 Putative uncharacterized protein | 811 | 1e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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