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Information for unigene UN17188
| FASTA Sequence |
| Unigene ID: UN17188 | Length: 1030 |
| SNP | AAGGTTGAGAACATTATTTATCTGTTCACAAAGAAAGCAAAACACAAATGAACAATGGGGAGATACTAAACAAAATACATAAAAGC
GGTCCATTTTGGTTGGTTGGTGAATGGTGGTGATAAGAGCAATTTGAAAAACAGAGGGAGGAAAGTTAATCCACCCACACTCAAAA
GTGTGATATCAATCAATTGATCCGACGACAGATAGTGATCCCATCACCAACGGGAAGCATGCAAATCTCGATCCTAGGGTCAGCAG
CGAGAGCCTTGTTAAGCTCAAGAACAAAGTCTCTGTAGTAACGAACGTACTTCCTCATCGGTGCATCAGGAGGGGCCACAACGGAG
CCGTTCCAAAGAGTGTTGTCGTAGCCGATGACTCCTCCAACTTTTACAAGATCGATCAAACGTTTATGGTAGTTGATGTAGTTGTC
TTTGTCAGCATCAACGAATATAAAGTCATACGTTCCATGGTTCTTCTCGTCAGCAACGAGTTCATCAAGAACAGGAAGAGCAGGGC
CTTCCCTGAAGTCGATCTTGTGAGATACACCAGCTTTCTCGATGATCGGTAGACCCAACTCGTAGTTCTCTCTGTTAACGTCCATA
GCTAGAATTTTGCCGTCTTCAGGGAGAGCAAGAGCGGTGGCGAGGAGAGAGTAGCCAGTGTAAACGCCGATCTCCATAGTGTTCTT
GGCGTTAACAAGCTTGATGAGCATGTTGAGAAACTGACCTTCATCTGCTGATGTTGTCATTATGTTCCAAGGGTGTTTTGCTGTGA
CTTCCCTAAGTTCTTTCGTTGATTCTGGTTCTCTTGGATACACACTTGTCTCCAGAATATACTGGTAGAGTTCGTCGCTCTGTAAG
AGACTCTTGTGACCGACTTCTTGGTGTCGGAGATTCTGAGATTGCTTGTCTTCTCCATTTGTAGGAGATGTCTTCGTTGTCTCTGC
TGTTGTCGTCGCCATCTCTCTCTCTGTATATGTTTTTTTTTTTTGAACAACTCTCTCTGTATACCTTAAAGTGTTTTTGGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABE41833 caffeoyl-CoA 3-O-methyltransferase [Brassica rapa subsp. pekinensis] | 1303 | 2e-141 |
| NP_195131 putative caffeoyl-CoA O-methyltransferase [Arabidopsis thaliana] | 1296 | 1e-140 |
| AAM66108 caffeoyl-CoA O-methyltransferase-like protein [Arabidopsis thaliana] | 1289 | 9e-140 |
| AAZ95245 putative caffeoyl-CoA O-methyltransferase protein [Isatis tinctoria] | 1288 | 1e-139 |
| ACJ38669 caffeoyl-CoA O-methyltransferase [Betula luminifera] | 1206 | 4e-130 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49499 Probable caffeoyl-CoA O-methyltransferase At4g34050 | 1296 | 6e-142 |
| Q43095 Caffeoyl-CoA O-methyltransferase | 1176 | 5e-128 |
| O65862 Caffeoyl-CoA O-methyltransferase 1 | 1175 | 6e-128 |
| Q40313 Caffeoyl-CoA O-methyltransferase | 1167 | 5e-127 |
| O04899 Caffeoyl-CoA O-methyltransferase 5 | 1166 | 7e-127 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A6XBP7 Caffeoyl-CoA 3-O-methyltransferase | 1303 | 1e-141 |
| Q0ZUG5 Putative caffeoyl-CoA O-methyltransferase protein | 1288 | 8e-140 |
| B8XPP9 Caffeoyl-CoA O-methyltransferase | 1206 | 3e-130 |
| Q5I2D1 Caffeoyl CoA 3-O-methyltransferase | 1205 | 3e-130 |
| A4ZKM6 Caffeoyl-CoA 3-O methyltransferase | 1194 | 6e-129 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34050.1 caffeoyl-CoA 3-O-methyltransferase, putative | 1297 | 4e-143 |
| AT4G26220.1 caffeoyl-CoA 3-O-methyltransferase, putative | 724 | 1e-076 |
| AT1G67980.1 CCoAMT; caffeoyl-CoA O-methyltransferase | 639 | 8e-067 |
| AT4G34050.2 caffeoyl-CoA 3-O-methyltransferase, putative | 626 | 3e-065 |
| AT1G67990.1 TSM1; N1,N5,N10-tris-(5-hydroxyferuloyl)spermidine O-methyltransferase/ caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase/ caffeoyl-CoA O-methyltransferase/ tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase/ trihydroxyferuloyl sper | 602 | 2e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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