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Information for unigene UN17192

FASTA Sequence
Unigene ID: UN17192Length: 2327  SNP
AGAAGAAAGAAAAAGACAAAACAAGGCGAAGGTTTGGTTACCACTCAAAATACGAACAGCTGTTTATCTTCCACCAAAGCACTTCG
TGCATCATCCTCTTCCCCTGTCTGATTCTTCGCCGTGCAAAAAAAAAGTGAAGACAATAGAAGCTCAGCTAGCTATGGCGTTTCTT
CTCCCGAATCTCTCTCCTTCATTCCTTCTTCAAACAGGAAAATCCATCAAAGAGAAACCCATTTCCACCCATTCTCTATCCATCTC
ATCATCATCTTCTTCTTCTTCCAGTAGCTACAATTTCGAAGAAGATAGCCTCTCTCTGCTAACTCTCCCCGTACAAGCTCCTCCTG
CTCCAGGTGCGCAGGTTAAGACCATGCCGAGTGGACAGGATAAGCACCTGCAGCATGGCAAAGATGAGTTCTACATCAATCTCGGT
CTAGCGATACGTACCCTTCGTGAAGATTTGCCTTTGCTCTTCACCAAAGATCTCAATTACGACATTTACAGGGATGATATAACATT
GGTGGATCCAGTGAACACTTTCTCTGGGATTGAGAACTACAAACTCATCTTCTGGGCACTCAGGTTTCATGGCAAGATTCTCTTCA
GAGATATCTCTCTTGAGATCTTCAGGGTTTGGCAACCATCAGAGAACATGATCCTCATCAGGTGGAATCTCAAAGGGGTGCCTAGA
GTTCCATGGGAGGCCAAAGGAGAGTTTCAGGGCACTTCTCGCTATAAACTAGACCGCAATGGCAAAATCTATGAGCATAAAGTTGA
TAACTTGGCTTTCAACTTCCCTCACCAGCTCAAACCTGCCACTTCTGTGTTGGATTTGGTCACTGCTTGCCCCGCCAGTCCCAATC
CGACTTTCATGTTTGGCTCTTCATACTCGTCTTCTTGGATTGAGTTCTATCAAGCTGTGAGAAGAACACTAGACAAGCAGCAAGAG
CAAATTCTTGTGCAAGACCGTTTTGTTATATGTTCATAGAACCATTGAATGGGTCACTCTCAGCTGTGTATATACTGTTGCATCGA
AGATAATATACATATAATGTGCAGGCATATGTAGATGTGGTTGACTTATGGAAGCAAACCTGTTTAACCCATGAGCTTGTACATTT
TGCCTATCGAATGTAAACAGACTTCATTATAGTTATCATATGTTTGAACACTCTTAAATTGAAGAAATTTTGAATAAAAGCTTATA
TATATGTTCAAAGTTTGGAGAAATCAAAAATAAATAACATTCTTTGCTCAAGTAGATGATAGATATCCTTTACGGAGTGGTTGCAA
CCGCAATGAAGGTCTCCAGGATTTGGCGTGGACCCATATGTCCGAGGAGGAGACCTCGAGATTACTACACCTTCAACCCTAGTCGC
GGTAAGGTGTGAGATCGATCTGGAATCGCTGCTTTCCTTTTGTGACCCTAGCAATCGTGATGAGCTCCTCTAGGAGTTCTTCTAGA
TGACGCAAAGGCCATTGAGTTGGACCATCAACTGGAGCACTTAGAGGATCATCATGAACCTCCATGAAAATTCCATCGACGCCAAC
GGCTACAGCTGTTCTCGCAATGCAGGGAATTAACTCCCGAAGGCCTCCACTAGCAACACCACCACCTTCCAACTTTTTGCCTGCAG
GTTGTTGGAGTGCATGGGTTATATCAGCAACAACAGGACAATTAGCTTCCCTCATCCATTCAAAGTTTCGTGGATCTACTATCAAA
TCATTGTATCCAAACATGGTTCCTCTTTCACAAACCATCACATTCGGATTCCCAGCTAGCCTGATCTTCTCAGCTGAATTTTCCAT
GACAGAAGGAGCACAAAACTGTCCTTTCTTAATATTGATAATTTTTCCAGTTTGGGCTGCCGCAACCAGAAGATCTGTCTGGCGAC
ATAAGAATGCTGGTATCTGAATTATATCAGCAACCTTGCCAACTTCTTCACACTGATACGCCTCGTGGACATCAGTTACAATGGGT
AAGTCATATGCTACTTTCACCTTCTCAAGAATCTTGAGACCCTCAGCCATGCCAGGACCTCGGAAGGACTTAGAAGAAGTTCTGTT
AGCTTTATCAAAACTCGACTTGAAAACCAGTGGCAACCCAACTTTTGTGGCAATGTGTTTGATGTGTTTTGCCAATCGAAGAATAT
GTTCCTCGGATTCGATCACATTTGGACCAGCCAACAAGAAGAATGGTTCAGCATCCTTAAGCTGATTGTAGAGTGGTGATGTTGCC
GCCATTCTTCCCGGGAAGCAAGAAAAGCTGTAAGGTTTTAGCTTTGATCTCGAAGTTGCAGAGTGAGTGCGAGTGAAGGCAAGTGA
GATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887789 predicted protein [Arabidopsis lyrata subsp. lyrata]14372e-156
NP_178068 2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis thaliana]14335e-156
AAM47465 AT5g09730/F17I14_80 [Arabidopsis thaliana]14292e-155
BAB41014 2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis thaliana]14273e-155
NP_173084 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [Arabidopsis thaliana]13521e-146

Swiss-Prot top hits (Blast detail)Scoree value
Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase14332e-157
O50044 2-dehydro-3-deoxyphosphooctonate aldolase13373e-146
B7J6R3 2-dehydro-3-deoxyphosphooctonate aldolase7064e-073
B5EPM6 2-dehydro-3-deoxyphosphooctonate aldolase7064e-073
Q8RE91 2-dehydro-3-deoxyphosphooctonate aldolase6958e-072

TrEMBL top hits (Blast detail)Scoree value
B9DG45 AT1G79500 protein14334e-156
Q6NQL4 At1g1634013529e-147
A9PC43 Predicted protein13384e-145
C6TEV7 Putative uncharacterized protein13358e-145
B9H7Y4 Predicted protein13277e-144

Arabidopsis top hits (Blast detail)Scoree value
AT1G79500.1 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14341e-158
AT1G79500.2 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14341e-158
AT1G79500.3 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14341e-158
AT1G79500.4 2-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)14341e-158
AT1G16340.1 ATKDSA2; 3-deoxy-8-phosphooctulonate synthase13533e-149

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
128  29%
 
112  7%
 
97  25%
 
66  21%
 
103  11%
 
82  7%

Unigene MembersMember information