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Information for unigene UN17202
| FASTA Sequence |
| Unigene ID: UN17202 | Length: 1628 |
| SNP | GGGGTTCTCTTTTCTCTCAATCGATCGTGTAAGTGAAGACGAAGAAGATGCAGGCGGTTTCAAGGAGATTAATCCAGCGTCCTCTC
TCCGGAGGAGCTTCAACCTATTCATCATCTTCTCTCAGATCGCTCCATGGAGTCTCAGATCGCCTTAATGGAAGTGATAATCGTCG
CTACTCGTCTTCCCTGGCTACTAAGGGAGTTGGACACCTCGCTCGCAAGGGTACTGGTGGCAGATCTTCCGTCAGTGGCATTGTAG
CTACGGTGTTTGGAGCCACTGGGTTTCTTGGTCGTTATCTTGTGCAGCAACTAGCTAAAATGGGATCGCAAGTGCTAGTTCCTTTC
CGAGGCTCAGAGGACAATCCTCGCCATCTCAAGTTGATGGGAGATTTAGGACAGGTAGTACCGATGAAATTTGACCCAAGAGATGA
AGACTCAATTAAGGCTGTCATGGCAAAGGCTAATGTCGTTATCAATCTCATTGGAAGAGAGTACGAGACCAGAAATTTCAGTTTCG
AAGAGGTGAATCATCACATGGCCGAGAAACTTGCATTGGTGGCCAAGGAACATGGTGGAATAATGAGATTTATTCAAGTTTCTTGT
CTGGGAGCTTCTGTATCATCTCCTTCAAGAATGCAGAGGGCAAAGGCTGCTGCTGAGGAAGCTGTCTTGAGCGCCCTTCCTGAGGC
GACAGTCATGAGACCTGCGACCATGATTGGTACAGAGGACAGAATCTTGAACCCCTGGGCAATGTTCGTTAAGAAATATGGTTTCC
TCCCGCTCATAGGTGGTGGGACCAACAAATTCCAGCCCGTATATGTGGTTGATGTTGCTGCTGCAATTGTTGCAGCTCTCAAGGAT
GATGGCTCTAGCATGGGTAAAACCTACGAATTGGGTGGTCCAGATGTCTTTACCCCTCATGATTTGGCAGAGATCATGTTTGATAT
GATCCGTGAATGGCCTCGATATGTTAAGCTTCCATTTCCAATTGCTAAGGCAATGGCGGGTCCTCGGGATTTCATGGTGAACAAAG
TCCCGTTTCCTCTACCCTCACCCCAGATCTTCAATCTGGATCAAATCAATGCGCTTACGACAGATACACTTGTATCTGACAAGGCC
TTGACGTTTCAGGATTTGGACCTTGTCCCTCATAAGTTGAAGGGATATCCAGTGGAGTTTCTTATCCAATATCGCAAAGGTGGTCC
TAACTTCGGTTCTACTGTGAGTGAAAAGATACCAACAGACTTCTACAATTGATGCTGCTTCTGCTCCAAGGTCGTTTTCCTGGACT
AATTATTTTCTCACAATGAAATTGCGGAAACCAGATTTGGTATTTTGATGCCTTTTCATTTGCTTCTGTCAAATAATAAAATGGTT
CTCCTCTTTCTTGTGTTCTGGACAAAAAGTGTAGCACATAAGTTAGAGAGGGGGCGATATCTGTCTTGATGGGACGATTTGGTCCC
CTTAAAAATTATGCATTTTCAAACTTCATGTGCCACTATGCTCTTGAGTATAACTAAAGTGTCATGTGTTTTGGTCTTTGCATTCC
ATATAGCTCAGAGTTGTATGTTTTATTTGCACAAAGACGTTTCAACTTGTACCTGTGTTCAATATAAGTTAAACCTTGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884196 catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] | 1943 | 2e-215 |
| NP_565469 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [Arabidopsis thaliana] | 1937 | 1e-214 |
| BAH20309 AT2G20360 [Arabidopsis thaliana] | 1653 | 1e-181 |
| XP_002321296 predicted protein [Populus trichocarpa] | 1571 | 3e-172 |
| ACU23211 unknown [Glycine max] | 1566 | 1e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0MQB3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 547 | 8e-055 |
| Q16795 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 547 | 8e-055 |
| P0CB81 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 546 | 1e-054 |
| P0CB82 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 546 | 1e-054 |
| P34943 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial | 545 | 1e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SK66 Putative NADH-ubiquinone oxireductase | 1937 | 8e-215 |
| B9DHU2 AT2G20360 protein (Fragment) | 1653 | 7e-182 |
| B9IBC6 Predicted protein | 1571 | 2e-172 |
| C6TJX1 Putative uncharacterized protein | 1566 | 9e-172 |
| B9GRC3 Predicted protein | 1565 | 1e-171 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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