Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17206

FASTA Sequence
Unigene ID: UN17206Length: 1293 SSRSNP
GATACGTTCTCTATTCTCTTCAAACATACGTTATTGACTTTCTCTCTCTATCTCTCTCTCTCAGAAGGAGTGAAGCTTGAATCATC
ATGGCCTCTCGTATTGCTAATGATGTGACCGAATTGATTGGGAACACTCCGTTGGTGTATCTGAACAGTGTTGCTGAAGGATGTGT
TGGTCGTGTTGCTGCTAAGCTTGAGATGATGGAGCCCTGCTCCAGCGTTAAAGACAGGATTGGTTTTAGCATGATCTCTGATGCAG
AGAAAAAGGGTCTGATTAAACCAGGAGAGAGTGTGTTGATTGAGCCAACAAGTGGAAACACTGGAGTTGGGTTAGCGTTCACGGCG
GCTGCCAAGGGCTACAAGCTTATTATTACCATGCCAGCTTCAATGAGCGTTGAGAGAAGAATCATCCTCTTAGCTTTTGGTGTTGA
GTTGGTTTTAACTGACCCGGCCAAGGGTATGAAAGGCGCTATCGCAAAGGCTGAAGAGATTTTGGCTAAAACACCCAATGGTTACA
TGCTCCAACAGTTTGAGAACCCTGCTAACCCAAAGATCCACTATGAGACAACTGGACCTGAGATTTGGAAAGGCACCGGTGGAAAA
ATCGATGGCTTTGTCTCTGGGATTGGTACTGGTGGTACCATAACAGGTGCGGGGAAGTATCTCAAGGAACAGAACCCCAACGTTAA
GCTGTATGGAGTGGAGCCAGTTGAAAGCGCAATTCTATCCGGTGGAAAGCCAGGCCCTCACAAGATTCAAGGGATAGGTGCTGGTT
TTATACCAGGTGTATTGGAGGTTAATCTTATAGATGAAGTTGTTCAAGTTTCAAGTGATGAATCCATCGATATGGCAAGGCTTCTT
GCTCGTAAAGAAGGTCTTCTTGTGGGAATATCATCAGGTGCAGCAGCTGCCGCAGCAATCAAACTTGCAAAGAGGCCAGAAAACGC
CGGGAAGCTTTTTGTGGCGGTGTTCCCAAGTTTCGGAGAGAGGTACCTGTCGACCGTACTATTCGATGCCACAAGGAAAGAAGCAG
AATCCATGACCTTCGAGGCTTGAATAGCTTTCAGAGCTGCAAGAAAAAAAATCTCCATTTCTTTGATTAGAGACGCCACTAATAAA
AAAAAAAGGATGTTACAGTTTCTTCCTAAAGAGAATTGTTCATCTTCAGTTTCAATGCGTCTTTTGTTTTTATTTATGTATCTTCT
GTGTGTGTGAGAACAAAACTCAAAACTCTATATTTCTTCTTGTGAACGAACCCACTTGCTGTTAATAAGTTTGAATTTTCTGTGTG
ACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACX70136 O-acetylserine(thiol)lyase isoform A6 [Brassica rapa subsp. chinensis]15883e-174
O23735 RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase; AltName: Full=OAS-TL615784e-173
O23733 RecName: Full=Cysteine synthase; Short=CSase; AltName: Full=O-acetylserine (thiol)-lyase; Short=OAS-TL; AltName: Full=O-acetylserine sulfhydrylase; AltName: Full=OAS-TL415731e-172
ACX70135 O-acetylserine(thiol)lyase isoform A4 [Brassica rapa subsp. chinensis]15731e-172
XP_002868245 O-acetylserine (thiol) lyase (oas-tl) isoform A1 [Arabidopsis lyrata subsp. lyrata]15632e-171

Swiss-Prot top hits (Blast detail)Scoree value
O23735 Cysteine synthase15782e-174
O23733 Cysteine synthase15736e-174
P47998 Cysteine synthase15574e-172
Q00834 Cysteine synthase14088e-155
Q43317 Cysteine synthase14071e-154

TrEMBL top hits (Blast detail)Scoree value
D0V0B3 Cysteine synthase15882e-174
D0V0B2 Cysteine synthase15731e-172
Q0WLF5 Cysteine synthase15513e-170
Q70IH9 Cysteine synthase (Fragment)14815e-162
B7FKU7 Cysteine synthase14125e-154

Arabidopsis top hits (Blast detail)Scoree value
AT4G14880.1 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase15583e-173
AT4G14880.2 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase15583e-173
AT3G59760.3 OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase12171e-133
AT3G59760.1 OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase12161e-133
AT2G43750.1 OASB (O-ACETYLSERINE (THIOL) LYASE B); cysteine synthase12043e-132

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  31%
 
94  31%
 
72  15%
 
122  15%
 
101  8%

Unigene MembersMember information