RadishBase

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Information for unigene UN17220

FASTA Sequence

Unigene ID:UN17220

Length: 988

AATTAAAATTATTTGACTTTCAACTCTAAATTTATAAAATACCATATTACGCCGTCGCTAGCTTTCTCCTCCCCATGGTTCATGGA
AACAGGCAAAAAACAGTACGAACAGCAATTATGATATTTAGGTAGACGATATTACACACATAAGTAGCTAAACAAAAAATTAAGTA
GCAGGAAACAACTCATCCCAAAGACGCTCAAGAACATAGACAGCTTATTACAATACTGTAGGAGCTTTTATTTGAGTACTAGCGCC
TCTTCGTTGCTTAAGCAGTAACTCCCAACAGTTTCTTCAGGTCCTTCTCAATGCTGAGAGGGGAAGTAGTTGGGGCGTAACGGTCC
ACAACATTCCCATCTTTGTCAACCAAGAACTTGGCGAAGTTCCACTTGATTCCGTCTCCAAAGAGCCCACCTTTGCTTGATTTCAG
GAACTTATAGATTGGAGCAGCCGTGTCACCATTCACATCAACCTTGTCAAAGATCGGGTACTCGGCCTTGAAACGGGTACAAGCAA
ACTGGACAATCTCTTCATTAGAACCAGGTTCTTGATTCCCAAACTGGTTACAGGGGAACGCAAGGATCTCAAACCCATGATCTTTG
TACTTCTGGTACAGCTGTGCAAGCTCGGTATAGTTCGAATTGGTCAAACCACACTGAGAAGCAACGTTTACAATCAAGAGAACCTT
CCCCTTGTAAGTGCTTAGATCAACATCATTTCCCTTCGCATCCTTGACGGTGAAATCATAGATGGACTTGGGCTCGGAGGAAGTGG
CCATGGAATGTTCAGACTTAGAGAGTTTAGCTCCCGTTGTTGATAAGGGAATCAGACGATGAGAAGTGAAAAGTGGTTTCGCAGAA
TTGGAGGACTTAGATGAGAACAGAGAGAGCGATGATGATGATGAATGAAGCTCGGACACGAAGATTGGTACTTCTTGTTGTTATAT
AGAGAAGCCGAAACGAGGATCTCAACATTTTCGACGATTCCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
XP_002874703 ATGPX6 [Arabidopsis lyrata subsp. lyrata]	1009	2e-107
BAJ33626 unnamed protein product [Thellungiella halophila]	999	3e-106
NP_192897 glutathione peroxidase [Arabidopsis thaliana]	982	3e-104
ACP28875 glutathionine peroxidase 6 [Eutrema halophilum]	976	2e-103
BAA24226 phospholipid hydroperoxide glutathione peroxidase-like protein [Arabidopsis thaliana]	846	2e-088

Swiss-Prot top hits (Blast detail)	Score	E value
O48646 Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial	982	1e-105
O23814 Probable phospholipid hydroperoxide glutathione peroxidase	761	6e-080
Q9LEF0 Probable phospholipid hydroperoxide glutathione peroxidase	741	1e-077
P30708 Probable phospholipid hydroperoxide glutathione peroxidase	741	1e-077
Q9FXS3 Probable phospholipid hydroperoxide glutathione peroxidase	739	2e-077

TrEMBL top hits (Blast detail)	Score	E value
D0PWB6 Glutathione peroxidase	976	1e-103
B9RCA6 Glutathione peroxidase	797	6e-083
Q9SME6 Glutathione peroxidase	788	7e-082
Q6A4W8 Glutathione peroxidase	784	2e-081
Q6JAG4 Glutathione peroxidase	778	1e-080

Arabidopsis top hits (Blast detail)	Score	E value
AT4G11600.1 ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase	983	1e-106
AT4G31870.1 ATGPX7 (glutathione peroxidase 7); glutathione peroxidase	657	6e-069
AT2G25080.1 ATGPX1 (GLUTATHIONE PEROXIDASE 1); glutathione peroxidase	627	2e-065
AT1G63460.1 glutathione peroxidase, putative	624	4e-065
AT2G31570.1 ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase	605	7e-063

EST library breakdown for ESTs in the assembly


8	10			32%


21	2			6%


6	7			23%


19	2			6%


10	4			13%


18	1			3%


12	2			6%


11	2			6%


9	1			3%

Unigene Members